Protein–RNA interactions for Protein: Q05895

Thbs3, Thrombospondin-3, mousemouse

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs3Q05895 Gm10253-201ENSMUST00000194270 940 ntBASIC12.61□□□□□ -0.39
Thbs3Q05895 Gm21871-201ENSMUST00000194621 696 ntBASIC12.61□□□□□ -0.39
Thbs3Q05895 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Thbs3Q05895 Gm5312-201ENSMUST00000203728 547 ntBASIC12.61□□□□□ -0.39
Thbs3Q05895 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Thbs3Q05895 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Thbs3Q05895 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Thbs3Q05895 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Thbs3Q05895 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC12.61□□□□□ -0.39
Thbs3Q05895 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC12.61□□□□□ -0.39
Thbs3Q05895 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Thbs3Q05895 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Thbs3Q05895 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Thbs3Q05895 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Thbs3Q05895 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Thbs3Q05895 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Thbs3Q05895 Gm45760-201ENSMUST00000212190 1782 ntBASIC12.61□□□□□ -0.39
Thbs3Q05895 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Thbs3Q05895 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Thbs3Q05895 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Thbs3Q05895 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Thbs3Q05895 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Thbs3Q05895 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC12.61□□□□□ -0.39
Thbs3Q05895 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Thbs3Q05895 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Thbs3Q05895 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC12.6□□□□□ -0.39
Thbs3Q05895 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Thbs3Q05895 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Thbs3Q05895 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Thbs3Q05895 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Thbs3Q05895 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Thbs3Q05895 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Thbs3Q05895 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
Thbs3Q05895 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Thbs3Q05895 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Thbs3Q05895 Gm13015-201ENSMUST00000118674 204 ntBASIC12.6□□□□□ -0.39
Thbs3Q05895 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Thbs3Q05895 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Thbs3Q05895 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Thbs3Q05895 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Thbs3Q05895 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Thbs3Q05895 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Thbs3Q05895 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Thbs3Q05895 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Thbs3Q05895 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Thbs3Q05895 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Thbs3Q05895 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Thbs3Q05895 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Thbs3Q05895 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Thbs3Q05895 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Thbs3Q05895 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Thbs3Q05895 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC12.59□□□□□ -0.39
Thbs3Q05895 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC12.59□□□□□ -0.39
Thbs3Q05895 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Thbs3Q05895 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
Thbs3Q05895 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Thbs3Q05895 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC12.59□□□□□ -0.39
Thbs3Q05895 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Thbs3Q05895 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Thbs3Q05895 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Thbs3Q05895 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Thbs3Q05895 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC12.59□□□□□ -0.39
Thbs3Q05895 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Thbs3Q05895 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Thbs3Q05895 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Thbs3Q05895 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Thbs3Q05895 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Thbs3Q05895 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Thbs3Q05895 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Thbs3Q05895 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Thbs3Q05895 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Thbs3Q05895 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Thbs3Q05895 AC140397.2-201ENSMUST00000224213 834 ntBASIC12.59□□□□□ -0.39
Thbs3Q05895 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Thbs3Q05895 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Thbs3Q05895 Gm8396-201ENSMUST00000057361 823 ntBASIC12.59□□□□□ -0.39
Thbs3Q05895 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Thbs3Q05895 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Thbs3Q05895 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Thbs3Q05895 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Thbs3Q05895 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Thbs3Q05895 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC12.59□□□□□ -0.39
Thbs3Q05895 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC12.59□□□□□ -0.39
Thbs3Q05895 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Thbs3Q05895 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Thbs3Q05895 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Thbs3Q05895 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Thbs3Q05895 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Thbs3Q05895 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Thbs3Q05895 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Thbs3Q05895 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Thbs3Q05895 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Thbs3Q05895 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Thbs3Q05895 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Thbs3Q05895 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
Thbs3Q05895 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Thbs3Q05895 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Thbs3Q05895 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Thbs3Q05895 Gm43205-201ENSMUST00000198622 1968 ntBASIC12.58□□□□□ -0.4
Thbs3Q05895 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms