Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC14.42□□□□□ -0.1
Pfdn6Q03958 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pfdn6Q03958 Rpph1-201ENSMUST00000175096 319 ntBASIC14.42□□□□□ -0.1
Pfdn6Q03958 Gm8000-201ENSMUST00000188378 592 ntBASIC14.42□□□□□ -0.1
Pfdn6Q03958 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC14.42□□□□□ -0.1
Pfdn6Q03958 Bloc1s5-203ENSMUST00000224902 612 ntBASIC14.42□□□□□ -0.1
Pfdn6Q03958 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pfdn6Q03958 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Pfdn6Q03958 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Pfdn6Q03958 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pfdn6Q03958 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.42□□□□□ -0.1
Pfdn6Q03958 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.42□□□□□ -0.1
Pfdn6Q03958 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.42□□□□□ -0.1
Pfdn6Q03958 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pfdn6Q03958 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Pfdn6Q03958 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pfdn6Q03958 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pfdn6Q03958 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pfdn6Q03958 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pfdn6Q03958 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.41□□□□□ -0.1
Pfdn6Q03958 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pfdn6Q03958 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.41□□□□□ -0.1
Pfdn6Q03958 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pfdn6Q03958 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pfdn6Q03958 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pfdn6Q03958 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Pfdn6Q03958 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pfdn6Q03958 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC14.41□□□□□ -0.1
Pfdn6Q03958 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC14.41□□□□□ -0.1
Pfdn6Q03958 Gm12017-201ENSMUST00000122453 1003 ntBASIC14.41□□□□□ -0.1
Pfdn6Q03958 Gm11025-201ENSMUST00000140773 466 ntBASIC14.41□□□□□ -0.1
Pfdn6Q03958 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Pfdn6Q03958 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC14.41□□□□□ -0.1
Pfdn6Q03958 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC14.41□□□□□ -0.1
Pfdn6Q03958 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC14.41□□□□□ -0.1
Pfdn6Q03958 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Pfdn6Q03958 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pfdn6Q03958 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Pfdn6Q03958 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pfdn6Q03958 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pfdn6Q03958 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pfdn6Q03958 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pfdn6Q03958 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Pfdn6Q03958 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pfdn6Q03958 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pfdn6Q03958 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Pfdn6Q03958 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pfdn6Q03958 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pfdn6Q03958 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC14.41□□□□□ -0.1
Pfdn6Q03958 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pfdn6Q03958 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pfdn6Q03958 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Pfdn6Q03958 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pfdn6Q03958 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Pfdn6Q03958 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Pfdn6Q03958 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pfdn6Q03958 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pfdn6Q03958 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pfdn6Q03958 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pfdn6Q03958 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Pfdn6Q03958 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pfdn6Q03958 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Pfdn6Q03958 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pfdn6Q03958 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pfdn6Q03958 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pfdn6Q03958 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC14.4□□□□□ -0.1
Pfdn6Q03958 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC14.4□□□□□ -0.1
Pfdn6Q03958 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pfdn6Q03958 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pfdn6Q03958 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC14.4□□□□□ -0.1
Pfdn6Q03958 Gm43514-201ENSMUST00000198852 424 ntBASIC14.4□□□□□ -0.1
Pfdn6Q03958 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC14.4□□□□□ -0.1
Pfdn6Q03958 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pfdn6Q03958 CT030684.1-201ENSMUST00000227292 914 ntBASIC14.4□□□□□ -0.1
Pfdn6Q03958 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pfdn6Q03958 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pfdn6Q03958 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pfdn6Q03958 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.4□□□□□ -0.1
Pfdn6Q03958 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.4□□□□□ -0.1
Pfdn6Q03958 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Pfdn6Q03958 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pfdn6Q03958 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pfdn6Q03958 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pfdn6Q03958 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pfdn6Q03958 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
Pfdn6Q03958 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pfdn6Q03958 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pfdn6Q03958 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pfdn6Q03958 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pfdn6Q03958 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pfdn6Q03958 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pfdn6Q03958 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Pfdn6Q03958 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pfdn6Q03958 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Pfdn6Q03958 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pfdn6Q03958 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Pfdn6Q03958 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Pfdn6Q03958 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pfdn6Q03958 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pfdn6Q03958 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms