Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC17.85■□□□□ 0.45
Smarcc1P97496 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Smarcc1P97496 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smarcc1P97496 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Smarcc1P97496 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Smarcc1P97496 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Smarcc1P97496 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC17.84■□□□□ 0.45
Smarcc1P97496 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smarcc1P97496 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Smarcc1P97496 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smarcc1P97496 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Smarcc1P97496 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Smarcc1P97496 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC17.84■□□□□ 0.45
Smarcc1P97496 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Smarcc1P97496 Gm8775-201ENSMUST00000170943 1327 ntBASIC17.84■□□□□ 0.45
Smarcc1P97496 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smarcc1P97496 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC17.84■□□□□ 0.45
Smarcc1P97496 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC17.84■□□□□ 0.45
Smarcc1P97496 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smarcc1P97496 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Smarcc1P97496 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smarcc1P97496 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC17.84■□□□□ 0.45
Smarcc1P97496 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC17.84■□□□□ 0.45
Smarcc1P97496 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Smarcc1P97496 Gm7287-201ENSMUST00000205267 602 ntBASIC17.84■□□□□ 0.45
Smarcc1P97496 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smarcc1P97496 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Smarcc1P97496 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Smarcc1P97496 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smarcc1P97496 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Smarcc1P97496 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smarcc1P97496 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smarcc1P97496 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smarcc1P97496 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Smarcc1P97496 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Smarcc1P97496 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Smarcc1P97496 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Smarcc1P97496 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Smarcc1P97496 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
Smarcc1P97496 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Smarcc1P97496 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Smarcc1P97496 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC17.83■□□□□ 0.44
Smarcc1P97496 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Smarcc1P97496 Gm12928-201ENSMUST00000117115 573 ntBASIC17.83■□□□□ 0.44
Smarcc1P97496 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC17.83■□□□□ 0.44
Smarcc1P97496 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC17.83■□□□□ 0.44
Smarcc1P97496 Gm27731-201ENSMUST00000185192 107 ntBASIC17.83■□□□□ 0.44
Smarcc1P97496 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Smarcc1P97496 Gm7561-201ENSMUST00000211203 886 ntBASIC17.83■□□□□ 0.44
Smarcc1P97496 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Smarcc1P97496 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Smarcc1P97496 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC17.83■□□□□ 0.44
Smarcc1P97496 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Smarcc1P97496 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Smarcc1P97496 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Smarcc1P97496 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Smarcc1P97496 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Smarcc1P97496 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Smarcc1P97496 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Smarcc1P97496 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Smarcc1P97496 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Smarcc1P97496 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Smarcc1P97496 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Smarcc1P97496 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Smarcc1P97496 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Smarcc1P97496 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smarcc1P97496 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
Smarcc1P97496 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Smarcc1P97496 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smarcc1P97496 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smarcc1P97496 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smarcc1P97496 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC17.82■□□□□ 0.44
Smarcc1P97496 Mir1247-201ENSMUST00000116706 82 ntBASIC17.82■□□□□ 0.44
Smarcc1P97496 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC17.82■□□□□ 0.44
Smarcc1P97496 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC17.82■□□□□ 0.44
Smarcc1P97496 Gm27847-201ENSMUST00000183711 107 ntBASIC17.82■□□□□ 0.44
Smarcc1P97496 Gm27375-201ENSMUST00000183799 107 ntBASIC17.82■□□□□ 0.44
Smarcc1P97496 Gm43094-201ENSMUST00000196549 921 ntBASIC17.82■□□□□ 0.44
Smarcc1P97496 Ighv8-14-201ENSMUST00000196781 358 ntBASIC17.82■□□□□ 0.44
Smarcc1P97496 Gm19078-201ENSMUST00000206311 727 ntBASIC17.82■□□□□ 0.44
Smarcc1P97496 AC159896.2-201ENSMUST00000214753 269 ntBASIC17.82■□□□□ 0.44
Smarcc1P97496 AC154319.1-201ENSMUST00000216330 312 ntBASIC17.82■□□□□ 0.44
Smarcc1P97496 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Smarcc1P97496 AL589735.1-201ENSMUST00000224353 270 ntBASIC17.82■□□□□ 0.44
Smarcc1P97496 AC155729.1-201ENSMUST00000227758 544 ntBASIC17.82■□□□□ 0.44
Smarcc1P97496 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smarcc1P97496 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smarcc1P97496 Gm6091-201ENSMUST00000098307 165 ntBASIC17.82■□□□□ 0.44
Smarcc1P97496 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smarcc1P97496 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smarcc1P97496 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smarcc1P97496 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Smarcc1P97496 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smarcc1P97496 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC17.82■□□□□ 0.44
Smarcc1P97496 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smarcc1P97496 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Smarcc1P97496 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smarcc1P97496 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smarcc1P97496 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Smarcc1P97496 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms