Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Lig3P97386 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lig3P97386 Gm6973-201ENSMUST00000117080 721 ntBASIC15.68■□□□□ 0.1
Lig3P97386 Gm12490-201ENSMUST00000120255 560 ntBASIC15.68■□□□□ 0.1
Lig3P97386 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC15.68■□□□□ 0.1
Lig3P97386 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC15.68■□□□□ 0.1
Lig3P97386 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Lig3P97386 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
Lig3P97386 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lig3P97386 Gm9824-201ENSMUST00000178707 561 ntBASIC15.68■□□□□ 0.1
Lig3P97386 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC15.68■□□□□ 0.1
Lig3P97386 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC15.68■□□□□ 0.1
Lig3P97386 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lig3P97386 Cdk7-205ENSMUST00000225990 1159 ntBASIC15.68■□□□□ 0.1
Lig3P97386 Rbfox2-208ENSMUST00000227930 1218 ntBASIC15.68■□□□□ 0.1
Lig3P97386 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lig3P97386 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lig3P97386 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lig3P97386 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lig3P97386 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC15.68■□□□□ 0.1
Lig3P97386 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lig3P97386 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC15.68■□□□□ 0.1
Lig3P97386 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lig3P97386 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lig3P97386 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Lig3P97386 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Lig3P97386 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lig3P97386 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lig3P97386 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
Lig3P97386 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lig3P97386 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lig3P97386 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lig3P97386 Efs-202ENSMUST00000227037 2540 ntBASIC15.67■□□□□ 0.1
Lig3P97386 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lig3P97386 Syt7-205ENSMUST00000224135 1557 ntBASIC15.67■□□□□ 0.1
Lig3P97386 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
Lig3P97386 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC15.67■□□□□ 0.1
Lig3P97386 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lig3P97386 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Lig3P97386 Gm8410-201ENSMUST00000117225 605 ntBASIC15.67■□□□□ 0.1
Lig3P97386 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Lig3P97386 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Lig3P97386 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Lig3P97386 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC15.67■□□□□ 0.1
Lig3P97386 AC130829.1-201ENSMUST00000221548 494 ntBASIC15.67■□□□□ 0.1
Lig3P97386 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lig3P97386 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lig3P97386 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC15.67■□□□□ 0.1
Lig3P97386 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lig3P97386 AC121805.2-201ENSMUST00000218808 2538 ntBASIC15.67■□□□□ 0.1
Lig3P97386 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Lig3P97386 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lig3P97386 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC15.67■□□□□ 0.1
Lig3P97386 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lig3P97386 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Lig3P97386 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lig3P97386 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lig3P97386 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC15.66■□□□□ 0.1
Lig3P97386 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lig3P97386 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lig3P97386 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Lig3P97386 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lig3P97386 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Lig3P97386 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Lig3P97386 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC15.66■□□□□ 0.1
Lig3P97386 Gm18737-201ENSMUST00000173594 937 ntBASIC15.66■□□□□ 0.1
Lig3P97386 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Lig3P97386 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Lig3P97386 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC15.66■□□□□ 0.1
Lig3P97386 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC15.66■□□□□ 0.1
Lig3P97386 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lig3P97386 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Lig3P97386 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lig3P97386 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lig3P97386 Gm13337-201ENSMUST00000119183 1594 ntBASIC15.66■□□□□ 0.1
Lig3P97386 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lig3P97386 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Lig3P97386 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Lig3P97386 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Lig3P97386 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lig3P97386 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lig3P97386 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lig3P97386 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Lig3P97386 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lig3P97386 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lig3P97386 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lig3P97386 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Lig3P97386 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC15.65■□□□□ 0.1
Lig3P97386 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC15.65■□□□□ 0.1
Lig3P97386 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lig3P97386 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lig3P97386 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lig3P97386 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Lig3P97386 Gm16215-201ENSMUST00000161990 637 ntBASIC15.65■□□□□ 0.1
Lig3P97386 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Lig3P97386 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lig3P97386 Gm44855-201ENSMUST00000205725 362 ntBASIC15.65■□□□□ 0.1
Lig3P97386 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC15.65■□□□□ 0.1
Lig3P97386 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lig3P97386 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms