Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nkx2-3P97334 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nkx2-3P97334 Gm11524-201ENSMUST00000119349 807 ntBASIC17.9■□□□□ 0.46
Nkx2-3P97334 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC17.9■□□□□ 0.46
Nkx2-3P97334 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC17.9■□□□□ 0.46
Nkx2-3P97334 AC166349.1-201ENSMUST00000220866 695 ntBASIC17.9■□□□□ 0.46
Nkx2-3P97334 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
Nkx2-3P97334 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nkx2-3P97334 Gm9899-201ENSMUST00000065519 555 ntBASIC17.9■□□□□ 0.46
Nkx2-3P97334 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nkx2-3P97334 Gm5356-201ENSMUST00000093326 615 ntBASIC17.9■□□□□ 0.46
Nkx2-3P97334 Gm29340-201ENSMUST00000188763 3854 ntBASIC17.9■□□□□ 0.46
Nkx2-3P97334 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Nkx2-3P97334 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC17.9■□□□□ 0.46
Nkx2-3P97334 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nkx2-3P97334 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nkx2-3P97334 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Nkx2-3P97334 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Nkx2-3P97334 Gm21038-201ENSMUST00000222205 1383 ntBASIC17.9■□□□□ 0.46
Nkx2-3P97334 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
Nkx2-3P97334 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
Nkx2-3P97334 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Nkx2-3P97334 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC17.89■□□□□ 0.46
Nkx2-3P97334 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Nkx2-3P97334 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nkx2-3P97334 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
Nkx2-3P97334 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nkx2-3P97334 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nkx2-3P97334 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nkx2-3P97334 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC17.89■□□□□ 0.45
Nkx2-3P97334 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC17.89■□□□□ 0.45
Nkx2-3P97334 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nkx2-3P97334 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC17.89■□□□□ 0.45
Nkx2-3P97334 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Nkx2-3P97334 Gm7561-201ENSMUST00000211203 886 ntBASIC17.89■□□□□ 0.45
Nkx2-3P97334 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC17.89■□□□□ 0.45
Nkx2-3P97334 AC110817.1-201ENSMUST00000225706 605 ntBASIC17.89■□□□□ 0.45
Nkx2-3P97334 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nkx2-3P97334 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nkx2-3P97334 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nkx2-3P97334 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nkx2-3P97334 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nkx2-3P97334 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nkx2-3P97334 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nkx2-3P97334 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nkx2-3P97334 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nkx2-3P97334 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nkx2-3P97334 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Nkx2-3P97334 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Nkx2-3P97334 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nkx2-3P97334 Mir1894-201ENSMUST00000122802 81 ntBASIC17.88■□□□□ 0.45
Nkx2-3P97334 Gm15429-201ENSMUST00000151268 798 ntBASIC17.88■□□□□ 0.45
Nkx2-3P97334 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nkx2-3P97334 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nkx2-3P97334 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nkx2-3P97334 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nkx2-3P97334 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Nkx2-3P97334 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nkx2-3P97334 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nkx2-3P97334 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Nkx2-3P97334 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nkx2-3P97334 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nkx2-3P97334 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Nkx2-3P97334 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nkx2-3P97334 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nkx2-3P97334 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nkx2-3P97334 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC17.87■□□□□ 0.45
Nkx2-3P97334 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nkx2-3P97334 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Nkx2-3P97334 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Nkx2-3P97334 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nkx2-3P97334 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Nkx2-3P97334 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nkx2-3P97334 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nkx2-3P97334 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nkx2-3P97334 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Nkx2-3P97334 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nkx2-3P97334 Gm37812-201ENSMUST00000195216 2475 ntBASIC17.87■□□□□ 0.45
Nkx2-3P97334 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Nkx2-3P97334 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Nkx2-3P97334 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nkx2-3P97334 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Nkx2-3P97334 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Nkx2-3P97334 Ighv1-51-201ENSMUST00000192903 354 ntBASIC17.87■□□□□ 0.45
Nkx2-3P97334 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nkx2-3P97334 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Nkx2-3P97334 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC17.87■□□□□ 0.45
Nkx2-3P97334 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nkx2-3P97334 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC17.87■□□□□ 0.45
Nkx2-3P97334 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Nkx2-3P97334 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nkx2-3P97334 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nkx2-3P97334 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nkx2-3P97334 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Nkx2-3P97334 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Nkx2-3P97334 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Nkx2-3P97334 Gm7287-201ENSMUST00000205267 602 ntBASIC17.86■□□□□ 0.45
Nkx2-3P97334 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Nkx2-3P97334 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nkx2-3P97334 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms