Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC9.55□□□□□ -0.88
PrkdcP97313 Rn7sk-201ENSMUST00000083103 331 ntBASIC9.55□□□□□ -0.88
PrkdcP97313 Gm26315-201ENSMUST00000083890 321 ntBASIC9.55□□□□□ -0.88
PrkdcP97313 Gm24447-201ENSMUST00000083977 338 ntBASIC9.55□□□□□ -0.88
PrkdcP97313 Gm10268-201ENSMUST00000085340 555 ntBASIC9.55□□□□□ -0.88
PrkdcP97313 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
PrkdcP97313 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC9.55□□□□□ -0.88
PrkdcP97313 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
PrkdcP97313 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
PrkdcP97313 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC9.55□□□□□ -0.88
PrkdcP97313 Gm44999-201ENSMUST00000207456 1493 ntBASIC9.55□□□□□ -0.88
PrkdcP97313 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
PrkdcP97313 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC9.55□□□□□ -0.88
PrkdcP97313 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
PrkdcP97313 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
PrkdcP97313 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
PrkdcP97313 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC9.54□□□□□ -0.88
PrkdcP97313 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC9.54□□□□□ -0.88
PrkdcP97313 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC9.54□□□□□ -0.88
PrkdcP97313 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC9.54□□□□□ -0.88
PrkdcP97313 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
PrkdcP97313 Gm18893-201ENSMUST00000198416 943 ntBASIC9.54□□□□□ -0.88
PrkdcP97313 AC126253.1-202ENSMUST00000226732 835 ntBASIC9.54□□□□□ -0.88
PrkdcP97313 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
PrkdcP97313 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
PrkdcP97313 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
PrkdcP97313 Gm42632-201ENSMUST00000201707 2411 ntBASIC9.54□□□□□ -0.88
PrkdcP97313 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
PrkdcP97313 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
PrkdcP97313 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
PrkdcP97313 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
PrkdcP97313 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
PrkdcP97313 Gm23699-201ENSMUST00000158835 135 ntBASIC9.54□□□□□ -0.88
PrkdcP97313 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC9.54□□□□□ -0.88
PrkdcP97313 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC9.54□□□□□ -0.88
PrkdcP97313 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC9.54□□□□□ -0.88
PrkdcP97313 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
PrkdcP97313 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
PrkdcP97313 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
PrkdcP97313 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC9.54□□□□□ -0.88
PrkdcP97313 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
PrkdcP97313 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
PrkdcP97313 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
PrkdcP97313 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
PrkdcP97313 BC037039-201ENSMUST00000192003 2205 ntBASIC9.54□□□□□ -0.88
PrkdcP97313 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
PrkdcP97313 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
PrkdcP97313 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
PrkdcP97313 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC9.54□□□□□ -0.88
PrkdcP97313 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
PrkdcP97313 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC9.54□□□□□ -0.88
PrkdcP97313 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
PrkdcP97313 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC9.54□□□□□ -0.88
PrkdcP97313 Gm45118-201ENSMUST00000208928 825 ntBASIC9.54□□□□□ -0.88
PrkdcP97313 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
PrkdcP97313 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
PrkdcP97313 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC9.54□□□□□ -0.88
PrkdcP97313 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
PrkdcP97313 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
PrkdcP97313 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
PrkdcP97313 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC9.54□□□□□ -0.88
PrkdcP97313 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
PrkdcP97313 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
PrkdcP97313 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
PrkdcP97313 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
PrkdcP97313 AC114543.1-201ENSMUST00000226451 1558 ntBASIC9.54□□□□□ -0.88
PrkdcP97313 Gm15276-201ENSMUST00000145953 498 ntBASIC9.54□□□□□ -0.88
PrkdcP97313 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC9.54□□□□□ -0.88
PrkdcP97313 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
PrkdcP97313 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC9.53□□□□□ -0.88
PrkdcP97313 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
PrkdcP97313 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
PrkdcP97313 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
PrkdcP97313 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
PrkdcP97313 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
PrkdcP97313 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
PrkdcP97313 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
PrkdcP97313 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
PrkdcP97313 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
PrkdcP97313 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
PrkdcP97313 Gm12616-201ENSMUST00000118594 382 ntBASIC9.53□□□□□ -0.88
PrkdcP97313 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
PrkdcP97313 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC9.53□□□□□ -0.88
PrkdcP97313 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC9.53□□□□□ -0.88
PrkdcP97313 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC9.53□□□□□ -0.88
PrkdcP97313 Gm12624-201ENSMUST00000177615 382 ntBASIC9.53□□□□□ -0.88
PrkdcP97313 Gm12621-201ENSMUST00000177760 382 ntBASIC9.53□□□□□ -0.88
PrkdcP97313 Gm12615-201ENSMUST00000177970 382 ntBASIC9.53□□□□□ -0.88
PrkdcP97313 Gm12622-201ENSMUST00000177975 382 ntBASIC9.53□□□□□ -0.88
PrkdcP97313 Gm12627-201ENSMUST00000178412 382 ntBASIC9.53□□□□□ -0.88
PrkdcP97313 Gm12625-201ENSMUST00000179122 382 ntBASIC9.53□□□□□ -0.88
PrkdcP97313 Gm12614-201ENSMUST00000179586 382 ntBASIC9.53□□□□□ -0.88
PrkdcP97313 Gm12613-201ENSMUST00000180323 382 ntBASIC9.53□□□□□ -0.88
PrkdcP97313 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC9.53□□□□□ -0.88
PrkdcP97313 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
PrkdcP97313 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
PrkdcP97313 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
PrkdcP97313 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
PrkdcP97313 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
PrkdcP97313 Gm43352-201ENSMUST00000196419 3065 ntBASIC9.53□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms