Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SgcbP82349 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SgcbP82349 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
SgcbP82349 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SgcbP82349 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SgcbP82349 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SgcbP82349 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SgcbP82349 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SgcbP82349 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SgcbP82349 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SgcbP82349 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SgcbP82349 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SgcbP82349 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SgcbP82349 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC12.79□□□□□ -0.36
SgcbP82349 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
SgcbP82349 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC12.79□□□□□ -0.36
SgcbP82349 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
SgcbP82349 Gm14042-201ENSMUST00000120139 833 ntBASIC12.79□□□□□ -0.36
SgcbP82349 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SgcbP82349 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SgcbP82349 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SgcbP82349 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
SgcbP82349 Gm18766-201ENSMUST00000189811 808 ntBASIC12.79□□□□□ -0.36
SgcbP82349 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC12.79□□□□□ -0.36
SgcbP82349 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SgcbP82349 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SgcbP82349 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SgcbP82349 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
SgcbP82349 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SgcbP82349 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SgcbP82349 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC12.79□□□□□ -0.36
SgcbP82349 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SgcbP82349 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
SgcbP82349 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SgcbP82349 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SgcbP82349 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SgcbP82349 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SgcbP82349 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC12.78□□□□□ -0.36
SgcbP82349 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC12.78□□□□□ -0.36
SgcbP82349 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SgcbP82349 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SgcbP82349 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SgcbP82349 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SgcbP82349 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
SgcbP82349 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SgcbP82349 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SgcbP82349 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SgcbP82349 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
SgcbP82349 Gm6222-201ENSMUST00000120787 396 ntBASIC12.78□□□□□ -0.36
SgcbP82349 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SgcbP82349 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
SgcbP82349 AA543401-201ENSMUST00000164248 1269 ntBASIC12.78□□□□□ -0.36
SgcbP82349 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC12.78□□□□□ -0.36
SgcbP82349 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SgcbP82349 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC12.78□□□□□ -0.36
SgcbP82349 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC12.78□□□□□ -0.36
SgcbP82349 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SgcbP82349 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SgcbP82349 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SgcbP82349 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SgcbP82349 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SgcbP82349 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
SgcbP82349 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SgcbP82349 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
SgcbP82349 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SgcbP82349 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SgcbP82349 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SgcbP82349 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SgcbP82349 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.78□□□□□ -0.36
SgcbP82349 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SgcbP82349 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC12.78□□□□□ -0.36
SgcbP82349 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC12.78□□□□□ -0.36
SgcbP82349 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SgcbP82349 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
SgcbP82349 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
SgcbP82349 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
SgcbP82349 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
SgcbP82349 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
SgcbP82349 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SgcbP82349 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
SgcbP82349 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.36
SgcbP82349 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SgcbP82349 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
SgcbP82349 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
SgcbP82349 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
SgcbP82349 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SgcbP82349 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.36
SgcbP82349 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
SgcbP82349 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SgcbP82349 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.77□□□□□ -0.37
SgcbP82349 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SgcbP82349 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
SgcbP82349 Gm13823-201ENSMUST00000119930 345 ntBASIC12.77□□□□□ -0.37
SgcbP82349 Gm15693-201ENSMUST00000120470 637 ntBASIC12.77□□□□□ -0.37
SgcbP82349 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SgcbP82349 Gm9719-201ENSMUST00000162765 543 ntBASIC12.77□□□□□ -0.37
SgcbP82349 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC12.77□□□□□ -0.37
SgcbP82349 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
SgcbP82349 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SgcbP82349 Gm29310-201ENSMUST00000185468 696 ntBASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms