Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
Shox2P70390 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shox2P70390 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shox2P70390 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shox2P70390 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Shox2P70390 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC14.18□□□□□ -0.14
Shox2P70390 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Shox2P70390 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC14.18□□□□□ -0.14
Shox2P70390 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shox2P70390 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shox2P70390 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shox2P70390 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shox2P70390 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Shox2P70390 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Shox2P70390 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Shox2P70390 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shox2P70390 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Shox2P70390 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shox2P70390 Gm27196-201ENSMUST00000184787 2582 ntBASIC14.18□□□□□ -0.14
Shox2P70390 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Shox2P70390 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shox2P70390 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Shox2P70390 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC14.18□□□□□ -0.14
Shox2P70390 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shox2P70390 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Shox2P70390 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shox2P70390 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shox2P70390 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shox2P70390 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Shox2P70390 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shox2P70390 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shox2P70390 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shox2P70390 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shox2P70390 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Shox2P70390 AL672049.1-201ENSMUST00000197943 91 ntBASIC14.17□□□□□ -0.14
Shox2P70390 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC14.17□□□□□ -0.14
Shox2P70390 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC14.17□□□□□ -0.14
Shox2P70390 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shox2P70390 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shox2P70390 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Shox2P70390 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.17□□□□□ -0.14
Shox2P70390 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shox2P70390 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Shox2P70390 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shox2P70390 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shox2P70390 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Shox2P70390 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shox2P70390 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shox2P70390 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shox2P70390 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Shox2P70390 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Shox2P70390 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shox2P70390 Mypopos-202ENSMUST00000205975 2321 ntBASIC14.16□□□□□ -0.14
Shox2P70390 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shox2P70390 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Shox2P70390 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC14.16□□□□□ -0.14
Shox2P70390 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Shox2P70390 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC14.16□□□□□ -0.14
Shox2P70390 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.16□□□□□ -0.14
Shox2P70390 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shox2P70390 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Shox2P70390 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Shox2P70390 Gm27867-201ENSMUST00000184778 125 ntBASIC14.16□□□□□ -0.14
Shox2P70390 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shox2P70390 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.16□□□□□ -0.14
Shox2P70390 Gm6296-201ENSMUST00000222599 943 ntBASIC14.16□□□□□ -0.14
Shox2P70390 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shox2P70390 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shox2P70390 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC14.16□□□□□ -0.14
Shox2P70390 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Shox2P70390 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shox2P70390 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shox2P70390 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shox2P70390 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shox2P70390 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Shox2P70390 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Shox2P70390 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.16□□□□□ -0.14
Shox2P70390 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shox2P70390 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shox2P70390 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Shox2P70390 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC14.15□□□□□ -0.14
Shox2P70390 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC14.15□□□□□ -0.14
Shox2P70390 Gm45706-201ENSMUST00000213063 2136 ntBASIC14.15□□□□□ -0.14
Shox2P70390 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shox2P70390 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Shox2P70390 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shox2P70390 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC14.15□□□□□ -0.14
Shox2P70390 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shox2P70390 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shox2P70390 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Shox2P70390 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Shox2P70390 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shox2P70390 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shox2P70390 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC14.15□□□□□ -0.14
Shox2P70390 Gm22240-201ENSMUST00000175225 82 ntBASIC14.15□□□□□ -0.14
Shox2P70390 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shox2P70390 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shox2P70390 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shox2P70390 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shox2P70390 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms