Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC15.77■□□□□ 0.12
Hmgb1P63158 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hmgb1P63158 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hmgb1P63158 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hmgb1P63158 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hmgb1P63158 Gm12892-201ENSMUST00000117367 1146 ntBASIC15.77■□□□□ 0.12
Hmgb1P63158 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC15.77■□□□□ 0.12
Hmgb1P63158 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Hmgb1P63158 Rpph1-201ENSMUST00000175096 319 ntBASIC15.77■□□□□ 0.12
Hmgb1P63158 Gm44492-201ENSMUST00000197012 141 ntBASIC15.77■□□□□ 0.12
Hmgb1P63158 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC15.77■□□□□ 0.12
Hmgb1P63158 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hmgb1P63158 AC174742.1-201ENSMUST00000218272 304 ntBASIC15.77■□□□□ 0.12
Hmgb1P63158 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hmgb1P63158 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.12
Hmgb1P63158 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Hmgb1P63158 AC166574.6-201ENSMUST00000227889 1806 ntBASIC15.77■□□□□ 0.11
Hmgb1P63158 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Hmgb1P63158 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Hmgb1P63158 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Hmgb1P63158 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Hmgb1P63158 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Hmgb1P63158 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Hmgb1P63158 Gm37411-201ENSMUST00000194180 2282 ntBASIC15.77■□□□□ 0.11
Hmgb1P63158 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Hmgb1P63158 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hmgb1P63158 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hmgb1P63158 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Hmgb1P63158 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Hmgb1P63158 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Hmgb1P63158 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hmgb1P63158 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hmgb1P63158 Gm43399-201ENSMUST00000202546 2374 ntBASIC15.76■□□□□ 0.11
Hmgb1P63158 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Hmgb1P63158 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
Hmgb1P63158 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC15.76■□□□□ 0.11
Hmgb1P63158 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hmgb1P63158 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC15.76■□□□□ 0.11
Hmgb1P63158 Gm15427-201ENSMUST00000117288 531 ntBASIC15.76■□□□□ 0.11
Hmgb1P63158 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC15.76■□□□□ 0.11
Hmgb1P63158 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC15.76■□□□□ 0.11
Hmgb1P63158 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC15.76■□□□□ 0.11
Hmgb1P63158 Gm27920-201ENSMUST00000183953 96 ntBASIC15.76■□□□□ 0.11
Hmgb1P63158 Gm27741-201ENSMUST00000185060 237 ntBASIC15.76■□□□□ 0.11
Hmgb1P63158 Klk2-ps-201ENSMUST00000205342 571 ntBASIC15.76■□□□□ 0.11
Hmgb1P63158 Gm5364-201ENSMUST00000216789 889 ntBASIC15.76■□□□□ 0.11
Hmgb1P63158 CT030684.1-201ENSMUST00000227292 914 ntBASIC15.76■□□□□ 0.11
Hmgb1P63158 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hmgb1P63158 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hmgb1P63158 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Hmgb1P63158 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hmgb1P63158 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hmgb1P63158 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hmgb1P63158 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Hmgb1P63158 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hmgb1P63158 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Hmgb1P63158 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hmgb1P63158 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hmgb1P63158 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hmgb1P63158 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hmgb1P63158 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hmgb1P63158 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Hmgb1P63158 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hmgb1P63158 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hmgb1P63158 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hmgb1P63158 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Hmgb1P63158 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Hmgb1P63158 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hmgb1P63158 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hmgb1P63158 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hmgb1P63158 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Hmgb1P63158 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Hmgb1P63158 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hmgb1P63158 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hmgb1P63158 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hmgb1P63158 Gm11543-201ENSMUST00000120758 370 ntBASIC15.75■□□□□ 0.11
Hmgb1P63158 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
Hmgb1P63158 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Hmgb1P63158 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Hmgb1P63158 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC15.75■□□□□ 0.11
Hmgb1P63158 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hmgb1P63158 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hmgb1P63158 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC15.75■□□□□ 0.11
Hmgb1P63158 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hmgb1P63158 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hmgb1P63158 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hmgb1P63158 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Hmgb1P63158 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC15.75■□□□□ 0.11
Hmgb1P63158 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Hmgb1P63158 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hmgb1P63158 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hmgb1P63158 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hmgb1P63158 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC15.74■□□□□ 0.11
Hmgb1P63158 Gm42471-201ENSMUST00000201457 1865 ntBASIC15.74■□□□□ 0.11
Hmgb1P63158 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Hmgb1P63158 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC15.74■□□□□ 0.11
Hmgb1P63158 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC15.74■□□□□ 0.11
Hmgb1P63158 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Hmgb1P63158 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC15.74■□□□□ 0.11
Hmgb1P63158 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms