Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Gm27430-201ENSMUST00000184585 107 ntBASIC13.55□□□□□ -0.24
Nup43P59235 Gm44333-201ENSMUST00000197168 107 ntBASIC13.55□□□□□ -0.24
Nup43P59235 AC124732.2-201ENSMUST00000221977 316 ntBASIC13.55□□□□□ -0.24
Nup43P59235 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nup43P59235 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nup43P59235 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Nup43P59235 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nup43P59235 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Nup43P59235 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nup43P59235 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nup43P59235 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nup43P59235 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nup43P59235 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nup43P59235 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
Nup43P59235 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nup43P59235 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC13.55□□□□□ -0.24
Nup43P59235 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nup43P59235 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Nup43P59235 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nup43P59235 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
Nup43P59235 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nup43P59235 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Nup43P59235 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nup43P59235 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Nup43P59235 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nup43P59235 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Nup43P59235 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nup43P59235 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC13.54□□□□□ -0.24
Nup43P59235 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nup43P59235 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC13.54□□□□□ -0.24
Nup43P59235 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nup43P59235 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nup43P59235 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nup43P59235 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nup43P59235 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC13.54□□□□□ -0.24
Nup43P59235 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nup43P59235 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Nup43P59235 Gm15693-201ENSMUST00000120470 637 ntBASIC13.54□□□□□ -0.24
Nup43P59235 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Nup43P59235 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
Nup43P59235 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Nup43P59235 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Nup43P59235 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC13.54□□□□□ -0.24
Nup43P59235 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC13.54□□□□□ -0.24
Nup43P59235 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nup43P59235 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC13.54□□□□□ -0.24
Nup43P59235 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nup43P59235 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nup43P59235 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nup43P59235 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nup43P59235 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nup43P59235 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC13.54□□□□□ -0.24
Nup43P59235 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nup43P59235 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Nup43P59235 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nup43P59235 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nup43P59235 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Nup43P59235 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Nup43P59235 Gm5763-201ENSMUST00000155951 1530 ntBASIC13.54□□□□□ -0.24
Nup43P59235 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nup43P59235 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nup43P59235 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nup43P59235 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nup43P59235 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.54□□□□□ -0.24
Nup43P59235 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nup43P59235 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
Nup43P59235 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nup43P59235 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nup43P59235 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC13.53□□□□□ -0.24
Nup43P59235 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nup43P59235 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nup43P59235 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Nup43P59235 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nup43P59235 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nup43P59235 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nup43P59235 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Nup43P59235 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nup43P59235 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nup43P59235 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nup43P59235 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nup43P59235 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Nup43P59235 Gm7336-201ENSMUST00000107041 1232 ntBASIC13.53□□□□□ -0.24
Nup43P59235 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC13.53□□□□□ -0.24
Nup43P59235 Gm8410-201ENSMUST00000117225 605 ntBASIC13.53□□□□□ -0.24
Nup43P59235 Gm13616-201ENSMUST00000120600 222 ntBASIC13.53□□□□□ -0.24
Nup43P59235 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nup43P59235 Gm22175-201ENSMUST00000175007 78 ntBASIC13.53□□□□□ -0.24
Nup43P59235 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nup43P59235 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nup43P59235 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nup43P59235 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Nup43P59235 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nup43P59235 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nup43P59235 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nup43P59235 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nup43P59235 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nup43P59235 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nup43P59235 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Nup43P59235 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC13.53□□□□□ -0.24
Nup43P59235 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms