Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lim2P56563 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lim2P56563 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lim2P56563 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lim2P56563 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Lim2P56563 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Lim2P56563 Gm15920-201ENSMUST00000118998 402 ntBASIC14.35□□□□□ -0.11
Lim2P56563 Gm15693-201ENSMUST00000120470 637 ntBASIC14.35□□□□□ -0.11
Lim2P56563 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC14.35□□□□□ -0.11
Lim2P56563 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lim2P56563 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lim2P56563 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Lim2P56563 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC14.35□□□□□ -0.11
Lim2P56563 Gm18766-201ENSMUST00000189811 808 ntBASIC14.35□□□□□ -0.11
Lim2P56563 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC14.35□□□□□ -0.11
Lim2P56563 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lim2P56563 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lim2P56563 Gm13517-201ENSMUST00000120782 1495 ntBASIC14.35□□□□□ -0.11
Lim2P56563 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Lim2P56563 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lim2P56563 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lim2P56563 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lim2P56563 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lim2P56563 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lim2P56563 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.35□□□□□ -0.11
Lim2P56563 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lim2P56563 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Lim2P56563 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lim2P56563 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Lim2P56563 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Lim2P56563 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.35□□□□□ -0.11
Lim2P56563 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lim2P56563 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Lim2P56563 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lim2P56563 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Lim2P56563 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lim2P56563 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lim2P56563 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lim2P56563 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Lim2P56563 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lim2P56563 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Lim2P56563 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Lim2P56563 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Lim2P56563 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Lim2P56563 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lim2P56563 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lim2P56563 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lim2P56563 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
Lim2P56563 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lim2P56563 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC14.34□□□□□ -0.11
Lim2P56563 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Lim2P56563 Gm44872-201ENSMUST00000207864 420 ntBASIC14.34□□□□□ -0.11
Lim2P56563 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC14.34□□□□□ -0.11
Lim2P56563 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Lim2P56563 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lim2P56563 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lim2P56563 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Lim2P56563 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lim2P56563 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lim2P56563 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lim2P56563 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Lim2P56563 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lim2P56563 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lim2P56563 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lim2P56563 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lim2P56563 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lim2P56563 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lim2P56563 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.33□□□□□ -0.11
Lim2P56563 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Lim2P56563 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Lim2P56563 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Lim2P56563 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Lim2P56563 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC14.33□□□□□ -0.12
Lim2P56563 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lim2P56563 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.12
Lim2P56563 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Lim2P56563 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.33□□□□□ -0.12
Lim2P56563 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC14.33□□□□□ -0.12
Lim2P56563 Gm13823-201ENSMUST00000119930 345 ntBASIC14.33□□□□□ -0.12
Lim2P56563 Gm14042-201ENSMUST00000120139 833 ntBASIC14.33□□□□□ -0.12
Lim2P56563 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Lim2P56563 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Lim2P56563 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC14.33□□□□□ -0.12
Lim2P56563 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Lim2P56563 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.33□□□□□ -0.12
Lim2P56563 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Lim2P56563 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Lim2P56563 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Lim2P56563 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC14.33□□□□□ -0.12
Lim2P56563 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC14.33□□□□□ -0.12
Lim2P56563 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Lim2P56563 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Lim2P56563 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lim2P56563 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Lim2P56563 Gm45630-201ENSMUST00000210243 1911 ntBASIC14.33□□□□□ -0.12
Lim2P56563 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC14.33□□□□□ -0.12
Lim2P56563 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lim2P56563 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lim2P56563 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lim2P56563 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms