Protein–RNA interactions for Protein: P52927

Hmga2, High mobility group protein HMGI-C, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga2P52927 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hmga2P52927 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC12.21□□□□□ -0.45
Hmga2P52927 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hmga2P52927 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hmga2P52927 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC12.21□□□□□ -0.45
Hmga2P52927 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hmga2P52927 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Hmga2P52927 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Hmga2P52927 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Hmga2P52927 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Hmga2P52927 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Hmga2P52927 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Hmga2P52927 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Hmga2P52927 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.21□□□□□ -0.46
Hmga2P52927 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Hmga2P52927 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Hmga2P52927 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Hmga2P52927 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.46
Hmga2P52927 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hmga2P52927 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hmga2P52927 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Hmga2P52927 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hmga2P52927 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hmga2P52927 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hmga2P52927 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hmga2P52927 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hmga2P52927 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hmga2P52927 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hmga2P52927 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hmga2P52927 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hmga2P52927 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.2□□□□□ -0.46
Hmga2P52927 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hmga2P52927 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC12.2□□□□□ -0.46
Hmga2P52927 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Hmga2P52927 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hmga2P52927 Gm16026-204ENSMUST00000162652 683 ntBASIC12.2□□□□□ -0.46
Hmga2P52927 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC12.2□□□□□ -0.46
Hmga2P52927 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC12.2□□□□□ -0.46
Hmga2P52927 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Hmga2P52927 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC12.2□□□□□ -0.46
Hmga2P52927 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC12.2□□□□□ -0.46
Hmga2P52927 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Hmga2P52927 Gm45747-201ENSMUST00000212203 999 ntBASIC12.2□□□□□ -0.46
Hmga2P52927 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hmga2P52927 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hmga2P52927 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hmga2P52927 Spr-ps1-201ENSMUST00000089584 605 ntBASIC12.2□□□□□ -0.46
Hmga2P52927 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hmga2P52927 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hmga2P52927 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Hmga2P52927 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hmga2P52927 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hmga2P52927 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hmga2P52927 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.2□□□□□ -0.46
Hmga2P52927 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hmga2P52927 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Hmga2P52927 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hmga2P52927 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.2□□□□□ -0.46
Hmga2P52927 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hmga2P52927 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hmga2P52927 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Hmga2P52927 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hmga2P52927 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hmga2P52927 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hmga2P52927 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hmga2P52927 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hmga2P52927 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hmga2P52927 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hmga2P52927 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.19□□□□□ -0.46
Hmga2P52927 Nudt18-203ENSMUST00000228768 1578 ntBASIC12.19□□□□□ -0.46
Hmga2P52927 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Hmga2P52927 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hmga2P52927 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Hmga2P52927 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hmga2P52927 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC12.19□□□□□ -0.46
Hmga2P52927 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hmga2P52927 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Hmga2P52927 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hmga2P52927 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hmga2P52927 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hmga2P52927 Gm17807-201ENSMUST00000186869 298 ntBASIC12.19□□□□□ -0.46
Hmga2P52927 AC154595.3-201ENSMUST00000224579 384 ntBASIC12.19□□□□□ -0.46
Hmga2P52927 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.19□□□□□ -0.46
Hmga2P52927 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hmga2P52927 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Hmga2P52927 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hmga2P52927 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hmga2P52927 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hmga2P52927 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Hmga2P52927 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hmga2P52927 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hmga2P52927 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hmga2P52927 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hmga2P52927 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hmga2P52927 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC12.18□□□□□ -0.46
Hmga2P52927 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC12.18□□□□□ -0.46
Hmga2P52927 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hmga2P52927 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hmga2P52927 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hmga2P52927 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 88.8 ms