Protein–RNA interactions for Protein: P46935

Nedd4, E3 ubiquitin-protein ligase NEDD4, mousemouse

Known RBP Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd4P46935 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nedd4P46935 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Nedd4P46935 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC17.13■□□□□ 0.33
Nedd4P46935 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
Nedd4P46935 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nedd4P46935 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nedd4P46935 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Nedd4P46935 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Nedd4P46935 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Nedd4P46935 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC17.13■□□□□ 0.33
Nedd4P46935 Gm12882-201ENSMUST00000121696 517 ntBASIC17.13■□□□□ 0.33
Nedd4P46935 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC17.13■□□□□ 0.33
Nedd4P46935 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC17.13■□□□□ 0.33
Nedd4P46935 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC17.13■□□□□ 0.33
Nedd4P46935 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC17.13■□□□□ 0.33
Nedd4P46935 Gm38002-201ENSMUST00000193255 180 ntBASIC17.13■□□□□ 0.33
Nedd4P46935 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Nedd4P46935 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Nedd4P46935 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nedd4P46935 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Nedd4P46935 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Nedd4P46935 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC17.13■□□□□ 0.33
Nedd4P46935 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nedd4P46935 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
Nedd4P46935 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Nedd4P46935 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nedd4P46935 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Nedd4P46935 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Nedd4P46935 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nedd4P46935 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nedd4P46935 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nedd4P46935 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC17.12■□□□□ 0.33
Nedd4P46935 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nedd4P46935 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nedd4P46935 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Nedd4P46935 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nedd4P46935 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nedd4P46935 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Nedd4P46935 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
Nedd4P46935 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nedd4P46935 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nedd4P46935 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
Nedd4P46935 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nedd4P46935 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Nedd4P46935 Gm26464-201ENSMUST00000157094 305 ntBASIC17.12■□□□□ 0.33
Nedd4P46935 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nedd4P46935 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nedd4P46935 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC17.12■□□□□ 0.33
Nedd4P46935 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
Nedd4P46935 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nedd4P46935 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nedd4P46935 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nedd4P46935 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Nedd4P46935 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nedd4P46935 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Nedd4P46935 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Nedd4P46935 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Nedd4P46935 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nedd4P46935 Gm12846-201ENSMUST00000120431 1373 ntBASIC17.12■□□□□ 0.33
Nedd4P46935 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nedd4P46935 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nedd4P46935 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nedd4P46935 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nedd4P46935 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Nedd4P46935 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC17.12■□□□□ 0.33
Nedd4P46935 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
Nedd4P46935 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nedd4P46935 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nedd4P46935 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Nedd4P46935 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nedd4P46935 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nedd4P46935 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC17.11■□□□□ 0.33
Nedd4P46935 Gm16342-201ENSMUST00000124025 1025 ntBASIC17.11■□□□□ 0.33
Nedd4P46935 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nedd4P46935 Gm18753-201ENSMUST00000201000 566 ntBASIC17.11■□□□□ 0.33
Nedd4P46935 Gm3695-201ENSMUST00000087222 1009 ntBASIC17.11■□□□□ 0.33
Nedd4P46935 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nedd4P46935 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Nedd4P46935 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC17.11■□□□□ 0.33
Nedd4P46935 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nedd4P46935 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nedd4P46935 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nedd4P46935 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nedd4P46935 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nedd4P46935 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nedd4P46935 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nedd4P46935 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC17.11■□□□□ 0.33
Nedd4P46935 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nedd4P46935 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nedd4P46935 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Nedd4P46935 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Nedd4P46935 Gm21009-201ENSMUST00000197169 1669 ntBASIC17.1■□□□□ 0.33
Nedd4P46935 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nedd4P46935 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nedd4P46935 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nedd4P46935 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Nedd4P46935 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nedd4P46935 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nedd4P46935 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Nedd4P46935 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms