Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.95□□□□□ -0.02
HttP42859 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC14.95□□□□□ -0.02
HttP42859 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
HttP42859 Gm20632-201ENSMUST00000176760 2427 ntBASIC14.95□□□□□ -0.02
HttP42859 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
HttP42859 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.95□□□□□ -0.02
HttP42859 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HttP42859 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HttP42859 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
HttP42859 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HttP42859 Gm9083-201ENSMUST00000120423 819 ntBASIC14.95□□□□□ -0.02
HttP42859 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC14.95□□□□□ -0.02
HttP42859 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HttP42859 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC14.95□□□□□ -0.02
HttP42859 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HttP42859 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HttP42859 Gm5069-202ENSMUST00000192714 1011 ntBASIC14.95□□□□□ -0.02
HttP42859 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
HttP42859 Gm10752-201ENSMUST00000218348 729 ntBASIC14.95□□□□□ -0.02
HttP42859 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HttP42859 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HttP42859 Gm20426-201ENSMUST00000173657 440 ntBASIC14.94□□□□□ -0.02
HttP42859 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC14.94□□□□□ -0.02
HttP42859 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC14.94□□□□□ -0.02
HttP42859 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HttP42859 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HttP42859 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HttP42859 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
HttP42859 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
HttP42859 BC037039-201ENSMUST00000192003 2205 ntBASIC14.94□□□□□ -0.02
HttP42859 Gm5884-201ENSMUST00000036712 1479 ntBASIC14.94□□□□□ -0.02
HttP42859 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
HttP42859 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
HttP42859 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HttP42859 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.94□□□□□ -0.02
HttP42859 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.94□□□□□ -0.02
HttP42859 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HttP42859 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HttP42859 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC14.94□□□□□ -0.02
HttP42859 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
HttP42859 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
HttP42859 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC14.94□□□□□ -0.02
HttP42859 Gm42997-202ENSMUST00000200321 985 ntBASIC14.94□□□□□ -0.02
HttP42859 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC14.94□□□□□ -0.02
HttP42859 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HttP42859 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HttP42859 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HttP42859 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HttP42859 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC14.93□□□□□ -0.02
HttP42859 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC14.93□□□□□ -0.02
HttP42859 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HttP42859 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HttP42859 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HttP42859 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
HttP42859 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HttP42859 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HttP42859 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HttP42859 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.93□□□□□ -0.02
HttP42859 Gm24830-201ENSMUST00000102024 166 ntBASIC14.93□□□□□ -0.02
HttP42859 Gm25890-201ENSMUST00000177643 165 ntBASIC14.93□□□□□ -0.02
HttP42859 Rnu1b2-201ENSMUST00000178073 165 ntBASIC14.93□□□□□ -0.02
HttP42859 Rnu1b1-201ENSMUST00000178250 165 ntBASIC14.93□□□□□ -0.02
HttP42859 Gm22614-201ENSMUST00000178300 165 ntBASIC14.93□□□□□ -0.02
HttP42859 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
HttP42859 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
HttP42859 Gm45770-201ENSMUST00000212105 616 ntBASIC14.93□□□□□ -0.02
HttP42859 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC14.93□□□□□ -0.02
HttP42859 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HttP42859 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HttP42859 Gm22042-201ENSMUST00000082989 165 ntBASIC14.93□□□□□ -0.02
HttP42859 Gm26232-201ENSMUST00000083360 166 ntBASIC14.93□□□□□ -0.02
HttP42859 Gm24136-201ENSMUST00000083374 165 ntBASIC14.93□□□□□ -0.02
HttP42859 Rnu1b6-201ENSMUST00000083839 166 ntBASIC14.93□□□□□ -0.02
HttP42859 Gm26110-201ENSMUST00000083971 165 ntBASIC14.93□□□□□ -0.02
HttP42859 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HttP42859 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HttP42859 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HttP42859 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HttP42859 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC14.92□□□□□ -0.02
HttP42859 Gm11222-201ENSMUST00000119005 738 ntBASIC14.92□□□□□ -0.02
HttP42859 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
HttP42859 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
HttP42859 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
HttP42859 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HttP42859 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
HttP42859 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HttP42859 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
HttP42859 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HttP42859 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HttP42859 Gm29608-201ENSMUST00000190444 463 ntBASIC14.92□□□□□ -0.02
HttP42859 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC14.92□□□□□ -0.02
HttP42859 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HttP42859 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
HttP42859 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
HttP42859 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
HttP42859 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
HttP42859 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
HttP42859 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HttP42859 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
HttP42859 Gm12217-201ENSMUST00000118858 696 ntBASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms