Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Col18a1P39061 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Col18a1P39061 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col18a1P39061 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col18a1P39061 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col18a1P39061 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col18a1P39061 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col18a1P39061 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Col18a1P39061 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Col18a1P39061 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC18.63■□□□□ 0.57
Col18a1P39061 CT009718.3-201ENSMUST00000221116 367 ntBASIC18.63■□□□□ 0.57
Col18a1P39061 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col18a1P39061 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC18.63■□□□□ 0.57
Col18a1P39061 Gm14608-201ENSMUST00000120030 1553 ntBASIC18.63■□□□□ 0.57
Col18a1P39061 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col18a1P39061 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col18a1P39061 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col18a1P39061 Abhd6-203ENSMUST00000225234 1958 ntBASIC18.62■□□□□ 0.57
Col18a1P39061 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Col18a1P39061 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Col18a1P39061 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col18a1P39061 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col18a1P39061 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col18a1P39061 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col18a1P39061 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col18a1P39061 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Col18a1P39061 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC18.62■□□□□ 0.57
Col18a1P39061 Gm14017-201ENSMUST00000121934 386 ntBASIC18.62■□□□□ 0.57
Col18a1P39061 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Col18a1P39061 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col18a1P39061 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
Col18a1P39061 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Col18a1P39061 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Col18a1P39061 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Col18a1P39061 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Col18a1P39061 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col18a1P39061 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col18a1P39061 BC037039-201ENSMUST00000192003 2205 ntBASIC18.62■□□□□ 0.57
Col18a1P39061 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Col18a1P39061 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Col18a1P39061 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Col18a1P39061 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col18a1P39061 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC18.61■□□□□ 0.57
Col18a1P39061 Gm44616-201ENSMUST00000206417 1732 ntBASIC18.61■□□□□ 0.57
Col18a1P39061 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col18a1P39061 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Col18a1P39061 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Col18a1P39061 Gm12217-201ENSMUST00000118858 696 ntBASIC18.61■□□□□ 0.57
Col18a1P39061 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col18a1P39061 Gm34767-201ENSMUST00000191813 1062 ntBASIC18.61■□□□□ 0.57
Col18a1P39061 Gm5781-201ENSMUST00000219792 443 ntBASIC18.61■□□□□ 0.57
Col18a1P39061 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col18a1P39061 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col18a1P39061 Gm10702-201ENSMUST00000098929 1268 ntBASIC18.61■□□□□ 0.57
Col18a1P39061 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC18.61■□□□□ 0.57
Col18a1P39061 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Col18a1P39061 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Col18a1P39061 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Col18a1P39061 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col18a1P39061 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Col18a1P39061 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Col18a1P39061 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC18.6■□□□□ 0.57
Col18a1P39061 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC18.6■□□□□ 0.57
Col18a1P39061 AC134254.1-201ENSMUST00000221362 167 ntBASIC18.6■□□□□ 0.57
Col18a1P39061 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Col18a1P39061 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Col18a1P39061 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
Col18a1P39061 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col18a1P39061 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col18a1P39061 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col18a1P39061 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col18a1P39061 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Col18a1P39061 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col18a1P39061 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Col18a1P39061 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col18a1P39061 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Col18a1P39061 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col18a1P39061 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
Col18a1P39061 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Col18a1P39061 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Col18a1P39061 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Col18a1P39061 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC18.6■□□□□ 0.57
Col18a1P39061 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col18a1P39061 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Col18a1P39061 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col18a1P39061 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col18a1P39061 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col18a1P39061 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Col18a1P39061 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Col18a1P39061 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col18a1P39061 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col18a1P39061 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Col18a1P39061 Gm4081-201ENSMUST00000195287 1838 ntBASIC18.59■□□□□ 0.57
Col18a1P39061 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC18.59■□□□□ 0.57
Col18a1P39061 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC18.59■□□□□ 0.57
Col18a1P39061 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC18.59■□□□□ 0.57
Col18a1P39061 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Col18a1P39061 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Col18a1P39061 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC18.59■□□□□ 0.57
Col18a1P39061 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms