Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.74□□□□□ -0.21
Cdh4P39038 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Cdh4P39038 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cdh4P39038 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cdh4P39038 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdh4P39038 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdh4P39038 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdh4P39038 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Cdh4P39038 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Cdh4P39038 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdh4P39038 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdh4P39038 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdh4P39038 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Cdh4P39038 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdh4P39038 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cdh4P39038 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdh4P39038 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cdh4P39038 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdh4P39038 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdh4P39038 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Cdh4P39038 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Cdh4P39038 Gm7336-201ENSMUST00000107041 1232 ntBASIC13.73□□□□□ -0.21
Cdh4P39038 Gm6415-201ENSMUST00000118488 348 ntBASIC13.73□□□□□ -0.21
Cdh4P39038 Gm14042-201ENSMUST00000120139 833 ntBASIC13.73□□□□□ -0.21
Cdh4P39038 Gm15693-201ENSMUST00000120470 637 ntBASIC13.73□□□□□ -0.21
Cdh4P39038 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cdh4P39038 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC13.73□□□□□ -0.21
Cdh4P39038 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
Cdh4P39038 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdh4P39038 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdh4P39038 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdh4P39038 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Cdh4P39038 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC13.73□□□□□ -0.21
Cdh4P39038 Gm22175-201ENSMUST00000175007 78 ntBASIC13.73□□□□□ -0.21
Cdh4P39038 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdh4P39038 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC13.73□□□□□ -0.21
Cdh4P39038 AC139382.1-201ENSMUST00000221402 498 ntBASIC13.73□□□□□ -0.21
Cdh4P39038 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cdh4P39038 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdh4P39038 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Cdh4P39038 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cdh4P39038 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdh4P39038 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdh4P39038 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdh4P39038 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdh4P39038 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Cdh4P39038 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC13.73□□□□□ -0.21
Cdh4P39038 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdh4P39038 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Cdh4P39038 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdh4P39038 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdh4P39038 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cdh4P39038 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdh4P39038 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdh4P39038 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC13.72□□□□□ -0.21
Cdh4P39038 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdh4P39038 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Cdh4P39038 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdh4P39038 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Cdh4P39038 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC13.72□□□□□ -0.21
Cdh4P39038 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Cdh4P39038 Gm29310-201ENSMUST00000185468 696 ntBASIC13.72□□□□□ -0.21
Cdh4P39038 Gm21825-201ENSMUST00000185728 696 ntBASIC13.72□□□□□ -0.21
Cdh4P39038 Gm29109-201ENSMUST00000185895 696 ntBASIC13.72□□□□□ -0.21
Cdh4P39038 Gm21896-201ENSMUST00000186520 696 ntBASIC13.72□□□□□ -0.21
Cdh4P39038 Gm21873-201ENSMUST00000186728 696 ntBASIC13.72□□□□□ -0.21
Cdh4P39038 Gm21794-201ENSMUST00000187056 696 ntBASIC13.72□□□□□ -0.21
Cdh4P39038 Gm21880-201ENSMUST00000187275 696 ntBASIC13.72□□□□□ -0.21
Cdh4P39038 Gm21826-201ENSMUST00000187451 696 ntBASIC13.72□□□□□ -0.21
Cdh4P39038 Gm21198-201ENSMUST00000188393 696 ntBASIC13.72□□□□□ -0.21
Cdh4P39038 Gm21749-201ENSMUST00000189343 696 ntBASIC13.72□□□□□ -0.21
Cdh4P39038 Gm21901-201ENSMUST00000189568 696 ntBASIC13.72□□□□□ -0.21
Cdh4P39038 Gm29424-201ENSMUST00000189716 696 ntBASIC13.72□□□□□ -0.21
Cdh4P39038 Gm18766-201ENSMUST00000189811 808 ntBASIC13.72□□□□□ -0.21
Cdh4P39038 Gm28599-201ENSMUST00000189838 694 ntBASIC13.72□□□□□ -0.21
Cdh4P39038 Gm21867-201ENSMUST00000189917 696 ntBASIC13.72□□□□□ -0.21
Cdh4P39038 Gm29269-201ENSMUST00000190087 696 ntBASIC13.72□□□□□ -0.21
Cdh4P39038 Gm21722-201ENSMUST00000190153 696 ntBASIC13.72□□□□□ -0.21
Cdh4P39038 Gm28423-201ENSMUST00000190701 696 ntBASIC13.72□□□□□ -0.21
Cdh4P39038 Gm21899-201ENSMUST00000190745 696 ntBASIC13.72□□□□□ -0.21
Cdh4P39038 Gm21910-201ENSMUST00000191163 696 ntBASIC13.72□□□□□ -0.21
Cdh4P39038 Gm29541-201ENSMUST00000191351 678 ntBASIC13.72□□□□□ -0.21
Cdh4P39038 Gm21849-201ENSMUST00000191571 696 ntBASIC13.72□□□□□ -0.21
Cdh4P39038 Gm28678-201ENSMUST00000191593 696 ntBASIC13.72□□□□□ -0.21
Cdh4P39038 Gm20910-201ENSMUST00000193268 696 ntBASIC13.72□□□□□ -0.21
Cdh4P39038 Gm21871-201ENSMUST00000194621 696 ntBASIC13.72□□□□□ -0.21
Cdh4P39038 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdh4P39038 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdh4P39038 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdh4P39038 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdh4P39038 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Cdh4P39038 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdh4P39038 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cdh4P39038 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdh4P39038 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdh4P39038 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cdh4P39038 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Cdh4P39038 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdh4P39038 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdh4P39038 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms