Protein–RNA interactions for Protein: P32043

Hoxc5, Homeobox protein Hox-C5, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc5P32043 Gm28182-201ENSMUST00000188354 2477 ntBASIC13.32□□□□□ -0.28
Hoxc5P32043 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxc5P32043 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxc5P32043 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxc5P32043 Gm43056-201ENSMUST00000197865 2791 ntBASIC13.32□□□□□ -0.28
Hoxc5P32043 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxc5P32043 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxc5P32043 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxc5P32043 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxc5P32043 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.31□□□□□ -0.28
Hoxc5P32043 Gm13410-201ENSMUST00000117058 1415 ntBASIC13.31□□□□□ -0.28
Hoxc5P32043 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxc5P32043 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Hoxc5P32043 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxc5P32043 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC13.31□□□□□ -0.28
Hoxc5P32043 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxc5P32043 Gm12892-201ENSMUST00000117367 1146 ntBASIC13.31□□□□□ -0.28
Hoxc5P32043 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC13.31□□□□□ -0.28
Hoxc5P32043 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxc5P32043 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxc5P32043 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC13.31□□□□□ -0.28
Hoxc5P32043 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Hoxc5P32043 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxc5P32043 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxc5P32043 AC159295.1-201ENSMUST00000225326 940 ntBASIC13.31□□□□□ -0.28
Hoxc5P32043 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxc5P32043 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Hoxc5P32043 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Hoxc5P32043 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxc5P32043 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxc5P32043 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxc5P32043 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxc5P32043 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.31□□□□□ -0.28
Hoxc5P32043 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13.31□□□□□ -0.28
Hoxc5P32043 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxc5P32043 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxc5P32043 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxc5P32043 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxc5P32043 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.31□□□□□ -0.28
Hoxc5P32043 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxc5P32043 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Hoxc5P32043 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxc5P32043 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Hoxc5P32043 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.31□□□□□ -0.28
Hoxc5P32043 Gm13233-201ENSMUST00000118760 1443 ntBASIC13.3□□□□□ -0.28
Hoxc5P32043 Gm13244-201ENSMUST00000118855 1446 ntBASIC13.3□□□□□ -0.28
Hoxc5P32043 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxc5P32043 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxc5P32043 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC13.3□□□□□ -0.28
Hoxc5P32043 AC166574.6-201ENSMUST00000227889 1806 ntBASIC13.3□□□□□ -0.28
Hoxc5P32043 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxc5P32043 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC13.3□□□□□ -0.28
Hoxc5P32043 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxc5P32043 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.3□□□□□ -0.28
Hoxc5P32043 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC13.3□□□□□ -0.28
Hoxc5P32043 Gm12260-201ENSMUST00000122447 411 ntBASIC13.3□□□□□ -0.28
Hoxc5P32043 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
Hoxc5P32043 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC13.3□□□□□ -0.28
Hoxc5P32043 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxc5P32043 Gm9727-201ENSMUST00000161387 555 ntBASIC13.3□□□□□ -0.28
Hoxc5P32043 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxc5P32043 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxc5P32043 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxc5P32043 CT025555.1-201ENSMUST00000225901 1217 ntBASIC13.3□□□□□ -0.28
Hoxc5P32043 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxc5P32043 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxc5P32043 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxc5P32043 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxc5P32043 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Hoxc5P32043 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxc5P32043 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxc5P32043 AC131586.3-201ENSMUST00000228355 1367 ntBASIC13.3□□□□□ -0.28
Hoxc5P32043 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxc5P32043 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxc5P32043 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxc5P32043 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC13.3□□□□□ -0.28
Hoxc5P32043 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxc5P32043 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxc5P32043 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Hoxc5P32043 Acot6-202ENSMUST00000222921 3622 ntBASIC13.3□□□□□ -0.28
Hoxc5P32043 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxc5P32043 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Hoxc5P32043 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxc5P32043 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxc5P32043 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxc5P32043 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxc5P32043 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Hoxc5P32043 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxc5P32043 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxc5P32043 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxc5P32043 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.29□□□□□ -0.28
Hoxc5P32043 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxc5P32043 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxc5P32043 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxc5P32043 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC13.29□□□□□ -0.28
Hoxc5P32043 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxc5P32043 Gm6944-201ENSMUST00000182449 1006 ntBASIC13.29□□□□□ -0.28
Hoxc5P32043 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC13.29□□□□□ -0.28
Hoxc5P32043 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxc5P32043 Klk2-ps-201ENSMUST00000205342 571 ntBASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms