Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vcam1P29533 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Vcam1P29533 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vcam1P29533 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Vcam1P29533 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vcam1P29533 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vcam1P29533 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
Vcam1P29533 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC16.38■□□□□ 0.21
Vcam1P29533 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Vcam1P29533 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vcam1P29533 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vcam1P29533 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vcam1P29533 AC159196.2-201ENSMUST00000224082 1622 ntBASIC16.38■□□□□ 0.21
Vcam1P29533 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vcam1P29533 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vcam1P29533 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Vcam1P29533 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Vcam1P29533 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Vcam1P29533 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Vcam1P29533 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vcam1P29533 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vcam1P29533 Gm13385-201ENSMUST00000121089 220 ntBASIC16.38■□□□□ 0.21
Vcam1P29533 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC16.38■□□□□ 0.21
Vcam1P29533 Gm37748-201ENSMUST00000194379 1140 ntBASIC16.38■□□□□ 0.21
Vcam1P29533 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Vcam1P29533 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vcam1P29533 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC16.38■□□□□ 0.21
Vcam1P29533 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vcam1P29533 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC16.38■□□□□ 0.21
Vcam1P29533 Gm25857-201ENSMUST00000082788 129 ntBASIC16.38■□□□□ 0.21
Vcam1P29533 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vcam1P29533 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Vcam1P29533 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
Vcam1P29533 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Vcam1P29533 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vcam1P29533 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC16.38■□□□□ 0.21
Vcam1P29533 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Vcam1P29533 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC16.38■□□□□ 0.21
Vcam1P29533 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC16.38■□□□□ 0.21
Vcam1P29533 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vcam1P29533 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Vcam1P29533 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vcam1P29533 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vcam1P29533 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Vcam1P29533 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vcam1P29533 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vcam1P29533 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Vcam1P29533 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.38■□□□□ 0.21
Vcam1P29533 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vcam1P29533 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vcam1P29533 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vcam1P29533 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC16.37■□□□□ 0.21
Vcam1P29533 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC16.37■□□□□ 0.21
Vcam1P29533 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vcam1P29533 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
Vcam1P29533 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Vcam1P29533 Gm29340-201ENSMUST00000188763 3854 ntBASIC16.37■□□□□ 0.21
Vcam1P29533 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Vcam1P29533 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vcam1P29533 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vcam1P29533 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC16.37■□□□□ 0.21
Vcam1P29533 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vcam1P29533 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vcam1P29533 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vcam1P29533 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC16.37■□□□□ 0.21
Vcam1P29533 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC16.37■□□□□ 0.21
Vcam1P29533 Gm18307-201ENSMUST00000206864 949 ntBASIC16.37■□□□□ 0.21
Vcam1P29533 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC16.37■□□□□ 0.21
Vcam1P29533 AC155258.1-201ENSMUST00000219303 253 ntBASIC16.37■□□□□ 0.21
Vcam1P29533 Gm7446-201ENSMUST00000221035 1240 ntBASIC16.37■□□□□ 0.21
Vcam1P29533 AC150560.1-201ENSMUST00000227731 1187 ntBASIC16.37■□□□□ 0.21
Vcam1P29533 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vcam1P29533 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Vcam1P29533 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vcam1P29533 Gm43509-201ENSMUST00000196551 2594 ntBASIC16.37■□□□□ 0.21
Vcam1P29533 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Vcam1P29533 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vcam1P29533 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vcam1P29533 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vcam1P29533 Gm8131-201ENSMUST00000213783 1570 ntBASIC16.37■□□□□ 0.21
Vcam1P29533 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vcam1P29533 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vcam1P29533 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Vcam1P29533 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vcam1P29533 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC16.36■□□□□ 0.21
Vcam1P29533 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC16.36■□□□□ 0.21
Vcam1P29533 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vcam1P29533 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vcam1P29533 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Vcam1P29533 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Vcam1P29533 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
Vcam1P29533 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vcam1P29533 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vcam1P29533 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Vcam1P29533 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Vcam1P29533 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC16.36■□□□□ 0.21
Vcam1P29533 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vcam1P29533 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Vcam1P29533 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vcam1P29533 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms