Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Gm4691-201ENSMUST00000182339 1000 ntBASIC11.2□□□□□ -0.62
Ccl6P27784 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC11.2□□□□□ -0.62
Ccl6P27784 Gm2451-201ENSMUST00000199447 999 ntBASIC11.2□□□□□ -0.62
Ccl6P27784 Gm10290-201ENSMUST00000200451 999 ntBASIC11.2□□□□□ -0.62
Ccl6P27784 Gm20553-201ENSMUST00000204205 844 ntBASIC11.2□□□□□ -0.62
Ccl6P27784 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC11.2□□□□□ -0.62
Ccl6P27784 AC131187.1-201ENSMUST00000224567 809 ntBASIC11.2□□□□□ -0.62
Ccl6P27784 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccl6P27784 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccl6P27784 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccl6P27784 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccl6P27784 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccl6P27784 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Ccl6P27784 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccl6P27784 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC11.2□□□□□ -0.62
Ccl6P27784 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccl6P27784 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Ccl6P27784 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccl6P27784 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccl6P27784 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
Ccl6P27784 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccl6P27784 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccl6P27784 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccl6P27784 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccl6P27784 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccl6P27784 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC11.19□□□□□ -0.62
Ccl6P27784 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccl6P27784 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Ccl6P27784 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC11.19□□□□□ -0.62
Ccl6P27784 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Ccl6P27784 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccl6P27784 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Ccl6P27784 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Ccl6P27784 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC11.19□□□□□ -0.62
Ccl6P27784 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccl6P27784 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccl6P27784 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Ccl6P27784 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Ccl6P27784 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Ccl6P27784 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccl6P27784 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Ccl6P27784 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccl6P27784 Gm4913-201ENSMUST00000117075 1290 ntBASIC11.19□□□□□ -0.62
Ccl6P27784 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC11.19□□□□□ -0.62
Ccl6P27784 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccl6P27784 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Ccl6P27784 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccl6P27784 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Ccl6P27784 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC11.19□□□□□ -0.62
Ccl6P27784 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC11.19□□□□□ -0.62
Ccl6P27784 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Ccl6P27784 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC11.19□□□□□ -0.62
Ccl6P27784 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccl6P27784 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Ccl6P27784 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Ccl6P27784 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccl6P27784 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccl6P27784 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Ccl6P27784 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC11.19□□□□□ -0.62
Ccl6P27784 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccl6P27784 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccl6P27784 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Ccl6P27784 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Ccl6P27784 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccl6P27784 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccl6P27784 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC11.19□□□□□ -0.62
Ccl6P27784 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccl6P27784 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Ccl6P27784 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccl6P27784 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC11.19□□□□□ -0.62
Ccl6P27784 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccl6P27784 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Ccl6P27784 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Ccl6P27784 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccl6P27784 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccl6P27784 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccl6P27784 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccl6P27784 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccl6P27784 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC11.18□□□□□ -0.62
Ccl6P27784 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccl6P27784 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC11.18□□□□□ -0.62
Ccl6P27784 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Ccl6P27784 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC11.18□□□□□ -0.62
Ccl6P27784 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccl6P27784 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccl6P27784 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccl6P27784 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccl6P27784 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Ccl6P27784 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Ccl6P27784 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Ccl6P27784 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccl6P27784 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC11.18□□□□□ -0.62
Ccl6P27784 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Ccl6P27784 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Ccl6P27784 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccl6P27784 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccl6P27784 Gm10175-201ENSMUST00000086013 645 ntBASIC11.18□□□□□ -0.62
Ccl6P27784 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccl6P27784 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccl6P27784 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms