Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cd40lgP27548 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cd40lgP27548 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cd40lgP27548 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cd40lgP27548 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC13.25□□□□□ -0.29
Cd40lgP27548 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC13.25□□□□□ -0.29
Cd40lgP27548 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cd40lgP27548 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC13.25□□□□□ -0.29
Cd40lgP27548 Gm38225-201ENSMUST00000194001 393 ntBASIC13.25□□□□□ -0.29
Cd40lgP27548 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC13.25□□□□□ -0.29
Cd40lgP27548 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
Cd40lgP27548 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC13.25□□□□□ -0.29
Cd40lgP27548 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC13.25□□□□□ -0.29
Cd40lgP27548 Ap5m1-205ENSMUST00000227431 3757 ntBASIC13.25□□□□□ -0.29
Cd40lgP27548 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Cd40lgP27548 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cd40lgP27548 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cd40lgP27548 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cd40lgP27548 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Cd40lgP27548 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cd40lgP27548 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cd40lgP27548 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cd40lgP27548 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cd40lgP27548 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cd40lgP27548 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Cd40lgP27548 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cd40lgP27548 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cd40lgP27548 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Cd40lgP27548 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Cd40lgP27548 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cd40lgP27548 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cd40lgP27548 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cd40lgP27548 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC13.24□□□□□ -0.29
Cd40lgP27548 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cd40lgP27548 Gm6018-201ENSMUST00000216090 1306 ntBASIC13.24□□□□□ -0.29
Cd40lgP27548 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cd40lgP27548 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Cd40lgP27548 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cd40lgP27548 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cd40lgP27548 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC13.24□□□□□ -0.29
Cd40lgP27548 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC13.24□□□□□ -0.29
Cd40lgP27548 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC13.24□□□□□ -0.29
Cd40lgP27548 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cd40lgP27548 Mir6990-201ENSMUST00000183724 91 ntBASIC13.24□□□□□ -0.29
Cd40lgP27548 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cd40lgP27548 Gm43125-201ENSMUST00000201724 730 ntBASIC13.24□□□□□ -0.29
Cd40lgP27548 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC13.24□□□□□ -0.29
Cd40lgP27548 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC13.24□□□□□ -0.29
Cd40lgP27548 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cd40lgP27548 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Cd40lgP27548 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cd40lgP27548 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC13.24□□□□□ -0.29
Cd40lgP27548 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Cd40lgP27548 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cd40lgP27548 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cd40lgP27548 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cd40lgP27548 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cd40lgP27548 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cd40lgP27548 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cd40lgP27548 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cd40lgP27548 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cd40lgP27548 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cd40lgP27548 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cd40lgP27548 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cd40lgP27548 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cd40lgP27548 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cd40lgP27548 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cd40lgP27548 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cd40lgP27548 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Cd40lgP27548 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Cd40lgP27548 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cd40lgP27548 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Cd40lgP27548 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC13.23□□□□□ -0.29
Cd40lgP27548 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cd40lgP27548 Gm24158-201ENSMUST00000175263 71 ntBASIC13.23□□□□□ -0.29
Cd40lgP27548 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cd40lgP27548 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cd40lgP27548 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC13.23□□□□□ -0.29
Cd40lgP27548 Gm5312-201ENSMUST00000203728 547 ntBASIC13.23□□□□□ -0.29
Cd40lgP27548 Gm20553-201ENSMUST00000204205 844 ntBASIC13.23□□□□□ -0.29
Cd40lgP27548 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC13.23□□□□□ -0.29
Cd40lgP27548 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cd40lgP27548 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Cd40lgP27548 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cd40lgP27548 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.23□□□□□ -0.29
Cd40lgP27548 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cd40lgP27548 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cd40lgP27548 Nudt18-203ENSMUST00000228768 1578 ntBASIC13.23□□□□□ -0.29
Cd40lgP27548 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cd40lgP27548 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cd40lgP27548 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cd40lgP27548 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cd40lgP27548 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cd40lgP27548 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cd40lgP27548 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cd40lgP27548 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC13.22□□□□□ -0.29
Cd40lgP27548 Gm9768-201ENSMUST00000206007 2861 ntBASIC13.22□□□□□ -0.29
Cd40lgP27548 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cd40lgP27548 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cd40lgP27548 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms