Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Mir1982-201ENSMUST00000157368 74 ntBASIC12.61□□□□□ -0.39
Ccl3P10855 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccl3P10855 Gm18905-201ENSMUST00000205454 928 ntBASIC12.61□□□□□ -0.39
Ccl3P10855 AC166349.1-201ENSMUST00000220866 695 ntBASIC12.61□□□□□ -0.39
Ccl3P10855 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ccl3P10855 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccl3P10855 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Ccl3P10855 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccl3P10855 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccl3P10855 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccl3P10855 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ccl3P10855 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccl3P10855 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccl3P10855 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ccl3P10855 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Ccl3P10855 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccl3P10855 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ccl3P10855 Gm9816-201ENSMUST00000122292 1414 ntBASIC12.61□□□□□ -0.39
Ccl3P10855 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ccl3P10855 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccl3P10855 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC12.61□□□□□ -0.39
Ccl3P10855 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccl3P10855 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccl3P10855 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ccl3P10855 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccl3P10855 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccl3P10855 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC12.6□□□□□ -0.39
Ccl3P10855 Gm42632-201ENSMUST00000201707 2411 ntBASIC12.6□□□□□ -0.39
Ccl3P10855 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Ccl3P10855 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccl3P10855 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Ccl3P10855 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC12.6□□□□□ -0.39
Ccl3P10855 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Ccl3P10855 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Ccl3P10855 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Ccl3P10855 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccl3P10855 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccl3P10855 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC12.6□□□□□ -0.39
Ccl3P10855 Gm7067-201ENSMUST00000207698 1249 ntBASIC12.6□□□□□ -0.39
Ccl3P10855 Gm6007-201ENSMUST00000208170 823 ntBASIC12.6□□□□□ -0.39
Ccl3P10855 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.6□□□□□ -0.39
Ccl3P10855 Gm17794-201ENSMUST00000220252 955 ntBASIC12.6□□□□□ -0.39
Ccl3P10855 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccl3P10855 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccl3P10855 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccl3P10855 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccl3P10855 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccl3P10855 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccl3P10855 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccl3P10855 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.6□□□□□ -0.39
Ccl3P10855 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccl3P10855 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccl3P10855 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccl3P10855 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccl3P10855 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
Ccl3P10855 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Ccl3P10855 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccl3P10855 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccl3P10855 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccl3P10855 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ccl3P10855 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl3P10855 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl3P10855 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl3P10855 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl3P10855 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC12.59□□□□□ -0.39
Ccl3P10855 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl3P10855 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Ccl3P10855 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl3P10855 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl3P10855 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl3P10855 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl3P10855 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl3P10855 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl3P10855 Gm12390-201ENSMUST00000117897 397 ntBASIC12.59□□□□□ -0.39
Ccl3P10855 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl3P10855 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.59□□□□□ -0.39
Ccl3P10855 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl3P10855 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.59□□□□□ -0.39
Ccl3P10855 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC12.59□□□□□ -0.39
Ccl3P10855 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl3P10855 Gm44608-201ENSMUST00000206827 855 ntBASIC12.59□□□□□ -0.39
Ccl3P10855 Gm18027-201ENSMUST00000218947 619 ntBASIC12.59□□□□□ -0.39
Ccl3P10855 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl3P10855 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl3P10855 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl3P10855 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Ccl3P10855 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Ccl3P10855 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl3P10855 Gm5912-201ENSMUST00000122282 1438 ntBASIC12.59□□□□□ -0.39
Ccl3P10855 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC12.59□□□□□ -0.39
Ccl3P10855 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl3P10855 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.59□□□□□ -0.39
Ccl3P10855 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl3P10855 Gm16011-201ENSMUST00000121567 2662 ntBASIC12.59□□□□□ -0.39
Ccl3P10855 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl3P10855 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl3P10855 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl3P10855 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl3P10855 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl3P10855 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms