Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smim1P0C8K7 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smim1P0C8K7 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smim1P0C8K7 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smim1P0C8K7 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smim1P0C8K7 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smim1P0C8K7 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smim1P0C8K7 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smim1P0C8K7 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Smim1P0C8K7 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smim1P0C8K7 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Smim1P0C8K7 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Smim1P0C8K7 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smim1P0C8K7 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Smim1P0C8K7 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smim1P0C8K7 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smim1P0C8K7 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smim1P0C8K7 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC9.84□□□□□ -0.83
Smim1P0C8K7 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC9.84□□□□□ -0.83
Smim1P0C8K7 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC9.84□□□□□ -0.83
Smim1P0C8K7 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC9.84□□□□□ -0.83
Smim1P0C8K7 Gm5712-201ENSMUST00000199748 1043 ntBASIC9.84□□□□□ -0.83
Smim1P0C8K7 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC9.84□□□□□ -0.83
Smim1P0C8K7 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC9.84□□□□□ -0.83
Smim1P0C8K7 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC9.84□□□□□ -0.83
Smim1P0C8K7 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smim1P0C8K7 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smim1P0C8K7 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smim1P0C8K7 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC9.84□□□□□ -0.83
Smim1P0C8K7 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC9.84□□□□□ -0.83
Smim1P0C8K7 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Smim1P0C8K7 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smim1P0C8K7 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smim1P0C8K7 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smim1P0C8K7 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smim1P0C8K7 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Smim1P0C8K7 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smim1P0C8K7 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smim1P0C8K7 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Smim1P0C8K7 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smim1P0C8K7 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smim1P0C8K7 Gm28386-201ENSMUST00000189147 1849 ntBASIC9.84□□□□□ -0.83
Smim1P0C8K7 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Smim1P0C8K7 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Smim1P0C8K7 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Smim1P0C8K7 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smim1P0C8K7 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smim1P0C8K7 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Smim1P0C8K7 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smim1P0C8K7 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smim1P0C8K7 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC9.84□□□□□ -0.84
Smim1P0C8K7 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Smim1P0C8K7 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smim1P0C8K7 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smim1P0C8K7 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC9.83□□□□□ -0.84
Smim1P0C8K7 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC9.83□□□□□ -0.84
Smim1P0C8K7 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smim1P0C8K7 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smim1P0C8K7 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC9.83□□□□□ -0.84
Smim1P0C8K7 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Smim1P0C8K7 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smim1P0C8K7 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smim1P0C8K7 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC9.83□□□□□ -0.84
Smim1P0C8K7 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Smim1P0C8K7 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC9.83□□□□□ -0.84
Smim1P0C8K7 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Smim1P0C8K7 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smim1P0C8K7 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Smim1P0C8K7 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smim1P0C8K7 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Smim1P0C8K7 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Smim1P0C8K7 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Smim1P0C8K7 Gm8344-201ENSMUST00000119813 856 ntBASIC9.83□□□□□ -0.84
Smim1P0C8K7 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC9.83□□□□□ -0.84
Smim1P0C8K7 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Smim1P0C8K7 Mir1668-201ENSMUST00000184114 107 ntBASIC9.83□□□□□ -0.84
Smim1P0C8K7 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC9.83□□□□□ -0.84
Smim1P0C8K7 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC9.83□□□□□ -0.84
Smim1P0C8K7 AC164567.1-201ENSMUST00000219185 960 ntBASIC9.83□□□□□ -0.84
Smim1P0C8K7 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Smim1P0C8K7 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Smim1P0C8K7 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smim1P0C8K7 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Smim1P0C8K7 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smim1P0C8K7 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smim1P0C8K7 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smim1P0C8K7 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC9.83□□□□□ -0.84
Smim1P0C8K7 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smim1P0C8K7 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Smim1P0C8K7 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Smim1P0C8K7 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smim1P0C8K7 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smim1P0C8K7 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC9.83□□□□□ -0.84
Smim1P0C8K7 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Smim1P0C8K7 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smim1P0C8K7 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Smim1P0C8K7 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smim1P0C8K7 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Smim1P0C8K7 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC9.83□□□□□ -0.84
Smim1P0C8K7 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms