Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
PtcraP0C6B2 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
PtcraP0C6B2 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
PtcraP0C6B2 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
PtcraP0C6B2 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
PtcraP0C6B2 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
PtcraP0C6B2 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
PtcraP0C6B2 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
PtcraP0C6B2 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
PtcraP0C6B2 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC12.46□□□□□ -0.41
PtcraP0C6B2 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC12.46□□□□□ -0.41
PtcraP0C6B2 Gm5566-201ENSMUST00000116118 459 ntBASIC12.46□□□□□ -0.41
PtcraP0C6B2 Gm15957-201ENSMUST00000118893 974 ntBASIC12.46□□□□□ -0.41
PtcraP0C6B2 Gm15693-201ENSMUST00000120470 637 ntBASIC12.46□□□□□ -0.41
PtcraP0C6B2 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
PtcraP0C6B2 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
PtcraP0C6B2 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC12.46□□□□□ -0.41
PtcraP0C6B2 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC12.46□□□□□ -0.41
PtcraP0C6B2 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
PtcraP0C6B2 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
PtcraP0C6B2 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
PtcraP0C6B2 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
PtcraP0C6B2 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
PtcraP0C6B2 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
PtcraP0C6B2 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.42
PtcraP0C6B2 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
PtcraP0C6B2 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
PtcraP0C6B2 BC001981-202ENSMUST00000191393 1545 ntBASIC12.46□□□□□ -0.42
PtcraP0C6B2 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
PtcraP0C6B2 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC12.46□□□□□ -0.42
PtcraP0C6B2 Gm9109-201ENSMUST00000120254 1405 ntBASIC12.45□□□□□ -0.42
PtcraP0C6B2 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
PtcraP0C6B2 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
PtcraP0C6B2 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
PtcraP0C6B2 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
PtcraP0C6B2 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC12.45□□□□□ -0.42
PtcraP0C6B2 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
PtcraP0C6B2 Pcgf5-211ENSMUST00000225920 6443 ntBASIC12.45□□□□□ -0.42
PtcraP0C6B2 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PtcraP0C6B2 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PtcraP0C6B2 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
PtcraP0C6B2 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PtcraP0C6B2 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
PtcraP0C6B2 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PtcraP0C6B2 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
PtcraP0C6B2 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PtcraP0C6B2 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
PtcraP0C6B2 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PtcraP0C6B2 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
PtcraP0C6B2 Gm23935-201ENSMUST00000102303 57 ntBASIC12.45□□□□□ -0.42
PtcraP0C6B2 Gm24270-201ENSMUST00000102326 57 ntBASIC12.45□□□□□ -0.42
PtcraP0C6B2 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
PtcraP0C6B2 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PtcraP0C6B2 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
PtcraP0C6B2 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
PtcraP0C6B2 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC12.45□□□□□ -0.42
PtcraP0C6B2 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
PtcraP0C6B2 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PtcraP0C6B2 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
PtcraP0C6B2 Gm24245-201ENSMUST00000157318 57 ntBASIC12.45□□□□□ -0.42
PtcraP0C6B2 Gm26308-201ENSMUST00000157768 69 ntBASIC12.45□□□□□ -0.42
PtcraP0C6B2 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PtcraP0C6B2 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PtcraP0C6B2 Gm18766-201ENSMUST00000189811 808 ntBASIC12.45□□□□□ -0.42
PtcraP0C6B2 Gm29541-201ENSMUST00000191351 678 ntBASIC12.45□□□□□ -0.42
PtcraP0C6B2 Gm45453-201ENSMUST00000211758 853 ntBASIC12.45□□□□□ -0.42
PtcraP0C6B2 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC12.45□□□□□ -0.42
PtcraP0C6B2 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PtcraP0C6B2 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
PtcraP0C6B2 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC12.45□□□□□ -0.42
PtcraP0C6B2 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
PtcraP0C6B2 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PtcraP0C6B2 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PtcraP0C6B2 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
PtcraP0C6B2 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
PtcraP0C6B2 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PtcraP0C6B2 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
PtcraP0C6B2 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PtcraP0C6B2 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
PtcraP0C6B2 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PtcraP0C6B2 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PtcraP0C6B2 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
PtcraP0C6B2 Ap5m1-205ENSMUST00000227431 3757 ntBASIC12.45□□□□□ -0.42
PtcraP0C6B2 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
PtcraP0C6B2 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
PtcraP0C6B2 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
PtcraP0C6B2 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
PtcraP0C6B2 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
PtcraP0C6B2 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
PtcraP0C6B2 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
PtcraP0C6B2 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
PtcraP0C6B2 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
PtcraP0C6B2 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC12.44□□□□□ -0.42
PtcraP0C6B2 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
PtcraP0C6B2 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
PtcraP0C6B2 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
PtcraP0C6B2 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
PtcraP0C6B2 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
PtcraP0C6B2 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
PtcraP0C6B2 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms