Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Gm37736-201ENSMUST00000193564 2802 ntBASIC21.26■□□□□ 0.99
NclP09405 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NclP09405 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NclP09405 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NclP09405 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NclP09405 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC21.25■□□□□ 0.99
NclP09405 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
NclP09405 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC21.25■□□□□ 0.99
NclP09405 Gm43598-201ENSMUST00000202482 2479 ntBASIC21.25■□□□□ 0.99
NclP09405 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NclP09405 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
NclP09405 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
NclP09405 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
NclP09405 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NclP09405 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
NclP09405 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC21.25■□□□□ 0.99
NclP09405 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
NclP09405 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NclP09405 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NclP09405 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
NclP09405 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NclP09405 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
NclP09405 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NclP09405 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NclP09405 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
NclP09405 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
NclP09405 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC21.24■□□□□ 0.99
NclP09405 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NclP09405 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NclP09405 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
NclP09405 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
NclP09405 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
NclP09405 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NclP09405 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC21.24■□□□□ 0.99
NclP09405 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NclP09405 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
NclP09405 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NclP09405 Hist1h2al-201ENSMUST00000091708 339 ntBASIC21.24■□□□□ 0.99
NclP09405 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NclP09405 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
NclP09405 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NclP09405 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
NclP09405 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC21.24■□□□□ 0.99
NclP09405 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NclP09405 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
NclP09405 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NclP09405 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
NclP09405 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC21.23■□□□□ 0.99
NclP09405 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC21.23■□□□□ 0.99
NclP09405 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC21.23■□□□□ 0.99
NclP09405 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
NclP09405 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
NclP09405 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
NclP09405 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NclP09405 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NclP09405 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NclP09405 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC21.23■□□□□ 0.99
NclP09405 Gm12882-201ENSMUST00000121696 517 ntBASIC21.23■□□□□ 0.99
NclP09405 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
NclP09405 Gm9522-201ENSMUST00000182394 926 ntBASIC21.23■□□□□ 0.99
NclP09405 Gm33320-201ENSMUST00000192232 530 ntBASIC21.23■□□□□ 0.99
NclP09405 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC21.23■□□□□ 0.99
NclP09405 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
NclP09405 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NclP09405 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
NclP09405 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC21.23■□□□□ 0.99
NclP09405 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
NclP09405 Gm42632-201ENSMUST00000201707 2411 ntBASIC21.23■□□□□ 0.99
NclP09405 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
NclP09405 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NclP09405 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
NclP09405 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
NclP09405 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NclP09405 Gm45133-201ENSMUST00000207548 2773 ntBASIC21.22■□□□□ 0.99
NclP09405 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NclP09405 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
NclP09405 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC21.22■□□□□ 0.99
NclP09405 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
NclP09405 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC21.22■□□□□ 0.99
NclP09405 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC21.22■□□□□ 0.99
NclP09405 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC21.22■□□□□ 0.99
NclP09405 Gm45195-201ENSMUST00000205597 1008 ntBASIC21.22■□□□□ 0.99
NclP09405 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC21.22■□□□□ 0.99
NclP09405 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NclP09405 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
NclP09405 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NclP09405 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NclP09405 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC21.22■□□□□ 0.99
NclP09405 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NclP09405 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
NclP09405 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
NclP09405 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NclP09405 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
NclP09405 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NclP09405 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
NclP09405 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NclP09405 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
NclP09405 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NclP09405 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NclP09405 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms