Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hoxc8P09025 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hoxc8P09025 Gm16342-201ENSMUST00000124025 1025 ntBASIC15.15■□□□□ 0.02
Hoxc8P09025 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Hoxc8P09025 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Hoxc8P09025 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC15.15■□□□□ 0.02
Hoxc8P09025 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC15.15■□□□□ 0.02
Hoxc8P09025 Gm8652-201ENSMUST00000181363 964 ntBASIC15.15■□□□□ 0.02
Hoxc8P09025 Gm27486-201ENSMUST00000184923 80 ntBASIC15.15■□□□□ 0.02
Hoxc8P09025 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC15.15■□□□□ 0.02
Hoxc8P09025 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Hoxc8P09025 Gm6983-201ENSMUST00000214912 628 ntBASIC15.15■□□□□ 0.02
Hoxc8P09025 AC131690.1-201ENSMUST00000218406 374 ntBASIC15.15■□□□□ 0.02
Hoxc8P09025 AC166349.1-201ENSMUST00000220866 695 ntBASIC15.15■□□□□ 0.02
Hoxc8P09025 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC15.15■□□□□ 0.02
Hoxc8P09025 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hoxc8P09025 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Hoxc8P09025 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Hoxc8P09025 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hoxc8P09025 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hoxc8P09025 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hoxc8P09025 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hoxc8P09025 Gm13859-201ENSMUST00000119936 1423 ntBASIC15.15■□□□□ 0.02
Hoxc8P09025 Gm9816-201ENSMUST00000122292 1414 ntBASIC15.15■□□□□ 0.02
Hoxc8P09025 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hoxc8P09025 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hoxc8P09025 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hoxc8P09025 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Hoxc8P09025 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hoxc8P09025 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hoxc8P09025 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Hoxc8P09025 AC126549.2-201ENSMUST00000223997 1976 ntBASIC15.15■□□□□ 0.02
Hoxc8P09025 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hoxc8P09025 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Hoxc8P09025 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Hoxc8P09025 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC15.14■□□□□ 0.01
Hoxc8P09025 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hoxc8P09025 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hoxc8P09025 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Hoxc8P09025 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hoxc8P09025 Gm8835-201ENSMUST00000173096 1169 ntBASIC15.14■□□□□ 0.01
Hoxc8P09025 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Hoxc8P09025 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC15.14■□□□□ 0.01
Hoxc8P09025 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC15.14■□□□□ 0.01
Hoxc8P09025 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hoxc8P09025 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hoxc8P09025 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Hoxc8P09025 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hoxc8P09025 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hoxc8P09025 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hoxc8P09025 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC15.14■□□□□ 0.01
Hoxc8P09025 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hoxc8P09025 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Hoxc8P09025 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC15.14■□□□□ 0.01
Hoxc8P09025 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Hoxc8P09025 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Hoxc8P09025 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hoxc8P09025 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hoxc8P09025 Gm9200-201ENSMUST00000118513 1354 ntBASIC15.13■□□□□ 0.01
Hoxc8P09025 AC161252.3-201ENSMUST00000225465 1549 ntBASIC15.13■□□□□ 0.01
Hoxc8P09025 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Hoxc8P09025 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hoxc8P09025 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Hoxc8P09025 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hoxc8P09025 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Hoxc8P09025 Gm12485-201ENSMUST00000119641 291 ntBASIC15.13■□□□□ 0.01
Hoxc8P09025 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Hoxc8P09025 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hoxc8P09025 Gm24196-201ENSMUST00000179161 110 ntBASIC15.13■□□□□ 0.01
Hoxc8P09025 Gm29127-201ENSMUST00000188304 517 ntBASIC15.13■□□□□ 0.01
Hoxc8P09025 Gm5276-201ENSMUST00000196683 1047 ntBASIC15.13■□□□□ 0.01
Hoxc8P09025 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC15.13■□□□□ 0.01
Hoxc8P09025 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC15.13■□□□□ 0.01
Hoxc8P09025 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hoxc8P09025 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC15.13■□□□□ 0.01
Hoxc8P09025 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hoxc8P09025 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hoxc8P09025 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Hoxc8P09025 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Hoxc8P09025 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hoxc8P09025 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hoxc8P09025 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hoxc8P09025 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hoxc8P09025 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Hoxc8P09025 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Hoxc8P09025 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hoxc8P09025 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hoxc8P09025 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hoxc8P09025 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hoxc8P09025 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Hoxc8P09025 Gm37812-201ENSMUST00000195216 2475 ntBASIC15.12■□□□□ 0.01
Hoxc8P09025 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC15.12■□□□□ 0.01
Hoxc8P09025 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Hoxc8P09025 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15.12■□□□□ 0.01
Hoxc8P09025 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hoxc8P09025 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hoxc8P09025 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hoxc8P09025 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hoxc8P09025 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Hoxc8P09025 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms