Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
P06344 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC12.79□□□□□ -0.36
P06344 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC12.79□□□□□ -0.36
P06344 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
P06344 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
P06344 Gm20949-201ENSMUST00000206478 952 ntBASIC12.79□□□□□ -0.36
P06344 Gm6888-201ENSMUST00000221983 706 ntBASIC12.79□□□□□ -0.36
P06344 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
P06344 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
P06344 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
P06344 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
P06344 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
P06344 Gm44981-201ENSMUST00000205549 1943 ntBASIC12.79□□□□□ -0.36
P06344 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
P06344 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
P06344 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
P06344 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
P06344 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
P06344 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
P06344 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
P06344 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
P06344 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
P06344 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
P06344 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
P06344 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
P06344 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
P06344 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
P06344 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
P06344 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
P06344 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
P06344 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
P06344 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC12.78□□□□□ -0.36
P06344 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
P06344 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
P06344 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
P06344 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC12.78□□□□□ -0.36
P06344 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
P06344 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
P06344 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC12.78□□□□□ -0.36
P06344 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
P06344 Gm13453-201ENSMUST00000118708 357 ntBASIC12.78□□□□□ -0.36
P06344 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC12.78□□□□□ -0.36
P06344 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC12.78□□□□□ -0.36
P06344 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
P06344 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
P06344 AC090659.2-201ENSMUST00000225378 1186 ntBASIC12.78□□□□□ -0.36
P06344 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
P06344 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
P06344 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
P06344 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
P06344 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
P06344 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC12.78□□□□□ -0.36
P06344 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
P06344 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
P06344 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
P06344 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
P06344 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
P06344 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
P06344 AC159649.2-201ENSMUST00000222984 3223 ntBASIC12.77□□□□□ -0.36
P06344 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
P06344 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
P06344 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
P06344 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
P06344 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
P06344 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
P06344 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
P06344 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
P06344 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
P06344 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
P06344 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
P06344 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
P06344 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC12.77□□□□□ -0.37
P06344 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
P06344 Gm27533-201ENSMUST00000183800 152 ntBASIC12.77□□□□□ -0.37
P06344 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
P06344 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
P06344 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC12.77□□□□□ -0.37
P06344 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
P06344 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC12.77□□□□□ -0.37
P06344 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC12.77□□□□□ -0.37
P06344 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
P06344 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
P06344 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
P06344 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC12.77□□□□□ -0.37
P06344 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
P06344 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
P06344 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
P06344 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
P06344 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
P06344 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
P06344 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC12.77□□□□□ -0.37
P06344 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
P06344 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
P06344 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
P06344 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
P06344 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
P06344 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
P06344 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
P06344 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
P06344 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms