Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
P04224 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
P04224 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
P04224 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
P04224 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
P04224 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
P04224 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC12.61□□□□□ -0.39
P04224 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC12.61□□□□□ -0.39
P04224 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
P04224 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
P04224 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
P04224 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
P04224 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
P04224 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
P04224 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
P04224 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
P04224 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
P04224 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
P04224 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
P04224 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC12.6□□□□□ -0.39
P04224 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
P04224 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
P04224 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC12.6□□□□□ -0.39
P04224 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
P04224 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
P04224 Gm7935-201ENSMUST00000100555 1278 ntBASIC12.6□□□□□ -0.39
P04224 Gm13836-201ENSMUST00000121159 501 ntBASIC12.6□□□□□ -0.39
P04224 Gm7284-201ENSMUST00000131667 944 ntBASIC12.6□□□□□ -0.39
P04224 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
P04224 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
P04224 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
P04224 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
P04224 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
P04224 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
P04224 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
P04224 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
P04224 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
P04224 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
P04224 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
P04224 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
P04224 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
P04224 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
P04224 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
P04224 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
P04224 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
P04224 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
P04224 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
P04224 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
P04224 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.59□□□□□ -0.39
P04224 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
P04224 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.59□□□□□ -0.39
P04224 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
P04224 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.59□□□□□ -0.39
P04224 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
P04224 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
P04224 Gm8097-201ENSMUST00000117903 829 ntBASIC12.59□□□□□ -0.39
P04224 Gm15358-201ENSMUST00000119249 520 ntBASIC12.59□□□□□ -0.39
P04224 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC12.59□□□□□ -0.39
P04224 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
P04224 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
P04224 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
P04224 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
P04224 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
P04224 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
P04224 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
P04224 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
P04224 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
P04224 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
P04224 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
P04224 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
P04224 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
P04224 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
P04224 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
P04224 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC12.59□□□□□ -0.39
P04224 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
P04224 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
P04224 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
P04224 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
P04224 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
P04224 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
P04224 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
P04224 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
P04224 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
P04224 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
P04224 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
P04224 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
P04224 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.58□□□□□ -0.4
P04224 Gm21009-201ENSMUST00000197169 1669 ntBASIC12.58□□□□□ -0.4
P04224 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
P04224 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
P04224 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC12.58□□□□□ -0.4
P04224 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
P04224 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
P04224 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
P04224 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC12.58□□□□□ -0.4
P04224 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC12.58□□□□□ -0.4
P04224 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC12.58□□□□□ -0.4
P04224 AC153889.1-201ENSMUST00000219257 330 ntBASIC12.58□□□□□ -0.4
P04224 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
P04224 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms