Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Col4a1P02463 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
Col4a1P02463 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC17.32■□□□□ 0.36
Col4a1P02463 Gm27486-201ENSMUST00000184923 80 ntBASIC17.32■□□□□ 0.36
Col4a1P02463 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col4a1P02463 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC17.32■□□□□ 0.36
Col4a1P02463 AC073947.2-201ENSMUST00000215888 1130 ntBASIC17.32■□□□□ 0.36
Col4a1P02463 Gm10478-201ENSMUST00000084451 396 ntBASIC17.32■□□□□ 0.36
Col4a1P02463 Zkscan14-203ENSMUST00000198959 2243 ntBASIC17.32■□□□□ 0.36
Col4a1P02463 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col4a1P02463 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col4a1P02463 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col4a1P02463 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC17.32■□□□□ 0.36
Col4a1P02463 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Col4a1P02463 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Col4a1P02463 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC17.31■□□□□ 0.36
Col4a1P02463 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col4a1P02463 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col4a1P02463 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Col4a1P02463 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Col4a1P02463 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col4a1P02463 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col4a1P02463 Gm22018-201ENSMUST00000104357 131 ntBASIC17.31■□□□□ 0.36
Col4a1P02463 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC17.31■□□□□ 0.36
Col4a1P02463 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC17.31■□□□□ 0.36
Col4a1P02463 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC17.31■□□□□ 0.36
Col4a1P02463 Gm17420-201ENSMUST00000164753 153 ntBASIC17.31■□□□□ 0.36
Col4a1P02463 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col4a1P02463 Gm27514-201ENSMUST00000183692 110 ntBASIC17.31■□□□□ 0.36
Col4a1P02463 Gm27772-201ENSMUST00000184900 187 ntBASIC17.31■□□□□ 0.36
Col4a1P02463 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Col4a1P02463 Gm9823-201ENSMUST00000051212 327 ntBASIC17.31■□□□□ 0.36
Col4a1P02463 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col4a1P02463 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Col4a1P02463 CT010478.1-201ENSMUST00000220747 2787 ntBASIC17.31■□□□□ 0.36
Col4a1P02463 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Col4a1P02463 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col4a1P02463 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col4a1P02463 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col4a1P02463 Gm15198-201ENSMUST00000117283 177 ntBASIC17.3■□□□□ 0.36
Col4a1P02463 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col4a1P02463 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Col4a1P02463 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC17.3■□□□□ 0.36
Col4a1P02463 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
Col4a1P02463 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC17.3■□□□□ 0.36
Col4a1P02463 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col4a1P02463 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col4a1P02463 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Col4a1P02463 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col4a1P02463 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col4a1P02463 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col4a1P02463 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Col4a1P02463 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col4a1P02463 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Col4a1P02463 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col4a1P02463 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC17.29■□□□□ 0.36
Col4a1P02463 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col4a1P02463 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC17.29■□□□□ 0.36
Col4a1P02463 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC17.29■□□□□ 0.36
Col4a1P02463 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC17.29■□□□□ 0.36
Col4a1P02463 Gm18054-201ENSMUST00000207539 555 ntBASIC17.29■□□□□ 0.36
Col4a1P02463 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Col4a1P02463 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col4a1P02463 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col4a1P02463 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col4a1P02463 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col4a1P02463 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC17.29■□□□□ 0.36
Col4a1P02463 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC17.29■□□□□ 0.36
Col4a1P02463 Dctn4-202ENSMUST00000223590 1530 ntBASIC17.29■□□□□ 0.36
Col4a1P02463 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col4a1P02463 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col4a1P02463 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC17.29■□□□□ 0.36
Col4a1P02463 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col4a1P02463 Gm16177-201ENSMUST00000120728 718 ntBASIC17.29■□□□□ 0.36
Col4a1P02463 Gm6152-201ENSMUST00000151704 340 ntBASIC17.29■□□□□ 0.36
Col4a1P02463 Gm2445-201ENSMUST00000182798 989 ntBASIC17.29■□□□□ 0.36
Col4a1P02463 Mir8109-201ENSMUST00000184375 117 ntBASIC17.29■□□□□ 0.36
Col4a1P02463 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC17.29■□□□□ 0.36
Col4a1P02463 Gm38230-201ENSMUST00000193572 1159 ntBASIC17.29■□□□□ 0.36
Col4a1P02463 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col4a1P02463 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC17.29■□□□□ 0.36
Col4a1P02463 Gm11661-201ENSMUST00000121761 1327 ntBASIC17.29■□□□□ 0.36
Col4a1P02463 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col4a1P02463 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Col4a1P02463 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Col4a1P02463 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col4a1P02463 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col4a1P02463 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col4a1P02463 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col4a1P02463 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Col4a1P02463 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC17.28■□□□□ 0.36
Col4a1P02463 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Col4a1P02463 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col4a1P02463 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col4a1P02463 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col4a1P02463 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC17.28■□□□□ 0.36
Col4a1P02463 Gm9299-201ENSMUST00000206392 1140 ntBASIC17.28■□□□□ 0.36
Col4a1P02463 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Col4a1P02463 Gm18473-201ENSMUST00000220543 868 ntBASIC17.28■□□□□ 0.36
Col4a1P02463 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms