Protein–RNA interactions for Protein: P02301

H3f3c, Histone H3.3C, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3cP02301 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC12.33□□□□□ -0.44
H3f3cP02301 AC131710.1-201ENSMUST00000228336 990 ntBASIC12.33□□□□□ -0.44
H3f3cP02301 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
H3f3cP02301 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
H3f3cP02301 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
H3f3cP02301 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
H3f3cP02301 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
H3f3cP02301 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
H3f3cP02301 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
H3f3cP02301 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
H3f3cP02301 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
H3f3cP02301 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
H3f3cP02301 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
H3f3cP02301 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
H3f3cP02301 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC12.33□□□□□ -0.44
H3f3cP02301 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
H3f3cP02301 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
H3f3cP02301 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H3f3cP02301 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
H3f3cP02301 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H3f3cP02301 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
H3f3cP02301 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
H3f3cP02301 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H3f3cP02301 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
H3f3cP02301 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
H3f3cP02301 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
H3f3cP02301 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC12.32□□□□□ -0.44
H3f3cP02301 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC12.32□□□□□ -0.44
H3f3cP02301 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC12.32□□□□□ -0.44
H3f3cP02301 Gm38225-201ENSMUST00000194001 393 ntBASIC12.32□□□□□ -0.44
H3f3cP02301 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H3f3cP02301 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
H3f3cP02301 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
H3f3cP02301 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H3f3cP02301 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
H3f3cP02301 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
H3f3cP02301 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
H3f3cP02301 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
H3f3cP02301 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
H3f3cP02301 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H3f3cP02301 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H3f3cP02301 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
H3f3cP02301 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
H3f3cP02301 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H3f3cP02301 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H3f3cP02301 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H3f3cP02301 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
H3f3cP02301 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H3f3cP02301 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H3f3cP02301 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
H3f3cP02301 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H3f3cP02301 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
H3f3cP02301 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC12.31□□□□□ -0.44
H3f3cP02301 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H3f3cP02301 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H3f3cP02301 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H3f3cP02301 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H3f3cP02301 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
H3f3cP02301 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H3f3cP02301 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H3f3cP02301 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
H3f3cP02301 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
H3f3cP02301 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
H3f3cP02301 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
H3f3cP02301 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
H3f3cP02301 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC12.31□□□□□ -0.44
H3f3cP02301 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC12.31□□□□□ -0.44
H3f3cP02301 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC12.31□□□□□ -0.44
H3f3cP02301 Gm44335-201ENSMUST00000196879 141 ntBASIC12.31□□□□□ -0.44
H3f3cP02301 Gm44297-201ENSMUST00000198304 141 ntBASIC12.31□□□□□ -0.44
H3f3cP02301 Gm44346-201ENSMUST00000198851 141 ntBASIC12.31□□□□□ -0.44
H3f3cP02301 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
H3f3cP02301 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC12.31□□□□□ -0.44
H3f3cP02301 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC12.31□□□□□ -0.44
H3f3cP02301 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
H3f3cP02301 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC12.31□□□□□ -0.44
H3f3cP02301 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H3f3cP02301 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
H3f3cP02301 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H3f3cP02301 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H3f3cP02301 Gm6018-201ENSMUST00000216090 1306 ntBASIC12.31□□□□□ -0.44
H3f3cP02301 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
H3f3cP02301 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H3f3cP02301 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
H3f3cP02301 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H3f3cP02301 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC12.31□□□□□ -0.44
H3f3cP02301 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H3f3cP02301 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
H3f3cP02301 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
H3f3cP02301 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
H3f3cP02301 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
H3f3cP02301 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
H3f3cP02301 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
H3f3cP02301 Gm42632-201ENSMUST00000201707 2411 ntBASIC12.3□□□□□ -0.44
H3f3cP02301 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
H3f3cP02301 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
H3f3cP02301 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
H3f3cP02301 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
H3f3cP02301 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
H3f3cP02301 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms