Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC13.13□□□□□ -0.31
P01852 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC13.13□□□□□ -0.31
P01852 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
P01852 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
P01852 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
P01852 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC13.13□□□□□ -0.31
P01852 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
P01852 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.13□□□□□ -0.31
P01852 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
P01852 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
P01852 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
P01852 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
P01852 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
P01852 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
P01852 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
P01852 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
P01852 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
P01852 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
P01852 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
P01852 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
P01852 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
P01852 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
P01852 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
P01852 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
P01852 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
P01852 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
P01852 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC13.12□□□□□ -0.31
P01852 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
P01852 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
P01852 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
P01852 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
P01852 Gm27430-201ENSMUST00000184585 107 ntBASIC13.12□□□□□ -0.31
P01852 Gm37230-201ENSMUST00000194491 818 ntBASIC13.12□□□□□ -0.31
P01852 Gm44333-201ENSMUST00000197168 107 ntBASIC13.12□□□□□ -0.31
P01852 AC124732.2-201ENSMUST00000221977 316 ntBASIC13.12□□□□□ -0.31
P01852 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
P01852 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
P01852 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
P01852 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
P01852 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC13.12□□□□□ -0.31
P01852 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
P01852 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
P01852 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
P01852 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
P01852 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
P01852 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
P01852 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
P01852 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
P01852 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
P01852 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.11□□□□□ -0.31
P01852 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
P01852 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
P01852 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
P01852 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
P01852 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
P01852 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
P01852 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
P01852 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
P01852 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
P01852 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
P01852 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
P01852 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
P01852 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
P01852 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC13.11□□□□□ -0.31
P01852 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC13.11□□□□□ -0.31
P01852 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
P01852 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
P01852 Gm13015-201ENSMUST00000118674 204 ntBASIC13.11□□□□□ -0.31
P01852 Gm15693-201ENSMUST00000120470 637 ntBASIC13.11□□□□□ -0.31
P01852 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
P01852 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC13.11□□□□□ -0.31
P01852 Gm5779-201ENSMUST00000218467 910 ntBASIC13.11□□□□□ -0.31
P01852 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
P01852 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
P01852 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
P01852 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
P01852 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.11□□□□□ -0.31
P01852 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
P01852 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
P01852 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
P01852 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
P01852 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
P01852 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
P01852 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
P01852 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.11□□□□□ -0.31
P01852 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
P01852 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC13.1□□□□□ -0.31
P01852 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
P01852 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
P01852 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
P01852 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
P01852 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
P01852 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC13.1□□□□□ -0.31
P01852 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
P01852 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
P01852 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC13.1□□□□□ -0.31
P01852 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
P01852 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
P01852 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
P01852 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms