Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
ClppO88696 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ClppO88696 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ClppO88696 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ClppO88696 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
ClppO88696 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
ClppO88696 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ClppO88696 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ClppO88696 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
ClppO88696 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
ClppO88696 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ClppO88696 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ClppO88696 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ClppO88696 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
ClppO88696 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
ClppO88696 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ClppO88696 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
ClppO88696 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ClppO88696 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ClppO88696 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ClppO88696 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
ClppO88696 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC14.03□□□□□ -0.16
ClppO88696 Gm6539-201ENSMUST00000119157 1064 ntBASIC14.03□□□□□ -0.16
ClppO88696 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC14.03□□□□□ -0.16
ClppO88696 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC14.03□□□□□ -0.16
ClppO88696 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
ClppO88696 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC14.03□□□□□ -0.16
ClppO88696 Gm27920-201ENSMUST00000183953 96 ntBASIC14.03□□□□□ -0.16
ClppO88696 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
ClppO88696 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ClppO88696 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ClppO88696 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ClppO88696 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
ClppO88696 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC14.03□□□□□ -0.16
ClppO88696 Gm10728-201ENSMUST00000194292 1829 ntBASIC14.03□□□□□ -0.16
ClppO88696 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ClppO88696 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ClppO88696 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ClppO88696 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ClppO88696 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ClppO88696 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
ClppO88696 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ClppO88696 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ClppO88696 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
ClppO88696 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ClppO88696 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ClppO88696 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
ClppO88696 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ClppO88696 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
ClppO88696 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ClppO88696 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
ClppO88696 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ClppO88696 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
ClppO88696 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
ClppO88696 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.02□□□□□ -0.16
ClppO88696 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC14.02□□□□□ -0.16
ClppO88696 Gm6415-201ENSMUST00000118488 348 ntBASIC14.02□□□□□ -0.17
ClppO88696 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC14.02□□□□□ -0.17
ClppO88696 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC14.02□□□□□ -0.17
ClppO88696 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC14.02□□□□□ -0.17
ClppO88696 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ClppO88696 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ClppO88696 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
ClppO88696 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ClppO88696 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
ClppO88696 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC14.02□□□□□ -0.17
ClppO88696 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
ClppO88696 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
ClppO88696 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ClppO88696 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ClppO88696 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC14.02□□□□□ -0.17
ClppO88696 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ClppO88696 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ClppO88696 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ClppO88696 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ClppO88696 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ClppO88696 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ClppO88696 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ClppO88696 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ClppO88696 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ClppO88696 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ClppO88696 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ClppO88696 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ClppO88696 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
ClppO88696 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ClppO88696 Gm27306-201ENSMUST00000183970 107 ntBASIC14.01□□□□□ -0.17
ClppO88696 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC14.01□□□□□ -0.17
ClppO88696 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.01□□□□□ -0.17
ClppO88696 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
ClppO88696 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ClppO88696 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ClppO88696 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
ClppO88696 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ClppO88696 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
ClppO88696 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ClppO88696 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ClppO88696 Celf4-206ENSMUST00000224553 1729 ntBASIC14.01□□□□□ -0.17
ClppO88696 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ClppO88696 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
ClppO88696 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms