Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC13.69□□□□□ -0.22
Vti1bO88384 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Vti1bO88384 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Vti1bO88384 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
Vti1bO88384 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vti1bO88384 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.69□□□□□ -0.22
Vti1bO88384 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vti1bO88384 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Vti1bO88384 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vti1bO88384 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vti1bO88384 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Vti1bO88384 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vti1bO88384 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vti1bO88384 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vti1bO88384 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.69□□□□□ -0.22
Vti1bO88384 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vti1bO88384 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Vti1bO88384 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vti1bO88384 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Vti1bO88384 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vti1bO88384 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vti1bO88384 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vti1bO88384 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vti1bO88384 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC13.68□□□□□ -0.22
Vti1bO88384 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vti1bO88384 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
Vti1bO88384 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Vti1bO88384 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Vti1bO88384 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vti1bO88384 Gm11779-201ENSMUST00000118541 368 ntBASIC13.68□□□□□ -0.22
Vti1bO88384 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC13.68□□□□□ -0.22
Vti1bO88384 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vti1bO88384 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC13.68□□□□□ -0.22
Vti1bO88384 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC13.68□□□□□ -0.22
Vti1bO88384 Gm2272-201ENSMUST00000194903 582 ntBASIC13.68□□□□□ -0.22
Vti1bO88384 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC13.68□□□□□ -0.22
Vti1bO88384 Gm44945-201ENSMUST00000206764 1187 ntBASIC13.68□□□□□ -0.22
Vti1bO88384 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Vti1bO88384 Gm7229-201ENSMUST00000214719 1007 ntBASIC13.68□□□□□ -0.22
Vti1bO88384 AC159295.1-201ENSMUST00000225326 940 ntBASIC13.68□□□□□ -0.22
Vti1bO88384 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Vti1bO88384 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Vti1bO88384 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC13.68□□□□□ -0.22
Vti1bO88384 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vti1bO88384 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Vti1bO88384 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vti1bO88384 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Vti1bO88384 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vti1bO88384 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Vti1bO88384 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vti1bO88384 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vti1bO88384 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Vti1bO88384 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vti1bO88384 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.68□□□□□ -0.22
Vti1bO88384 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vti1bO88384 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.68□□□□□ -0.22
Vti1bO88384 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vti1bO88384 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vti1bO88384 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vti1bO88384 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vti1bO88384 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vti1bO88384 Gm42471-201ENSMUST00000201457 1865 ntBASIC13.67□□□□□ -0.22
Vti1bO88384 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vti1bO88384 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.67□□□□□ -0.22
Vti1bO88384 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Vti1bO88384 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vti1bO88384 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vti1bO88384 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vti1bO88384 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.67□□□□□ -0.22
Vti1bO88384 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Vti1bO88384 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vti1bO88384 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC13.67□□□□□ -0.22
Vti1bO88384 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC13.67□□□□□ -0.22
Vti1bO88384 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.67□□□□□ -0.22
Vti1bO88384 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.67□□□□□ -0.22
Vti1bO88384 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Vti1bO88384 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Vti1bO88384 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Vti1bO88384 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vti1bO88384 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.67□□□□□ -0.22
Vti1bO88384 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC13.67□□□□□ -0.22
Vti1bO88384 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC13.67□□□□□ -0.22
Vti1bO88384 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Vti1bO88384 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Vti1bO88384 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vti1bO88384 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Vti1bO88384 AC090659.1-201ENSMUST00000224334 768 ntBASIC13.67□□□□□ -0.22
Vti1bO88384 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC13.67□□□□□ -0.22
Vti1bO88384 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vti1bO88384 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vti1bO88384 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vti1bO88384 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vti1bO88384 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC13.67□□□□□ -0.22
Vti1bO88384 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vti1bO88384 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vti1bO88384 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vti1bO88384 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Vti1bO88384 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vti1bO88384 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Vti1bO88384 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 89.2 ms