Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Gm9115-201ENSMUST00000120192 1348 ntBASIC14.92□□□□□ -0.02
Ttc3O88196 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ttc3O88196 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.91□□□□□ -0.02
Ttc3O88196 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ttc3O88196 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ttc3O88196 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ttc3O88196 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Ttc3O88196 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC14.91□□□□□ -0.02
Ttc3O88196 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ttc3O88196 Gm4804-201ENSMUST00000182234 999 ntBASIC14.91□□□□□ -0.02
Ttc3O88196 Gm21470-201ENSMUST00000187680 696 ntBASIC14.91□□□□□ -0.02
Ttc3O88196 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC14.91□□□□□ -0.02
Ttc3O88196 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ttc3O88196 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ttc3O88196 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC14.91□□□□□ -0.02
Ttc3O88196 AC159196.2-201ENSMUST00000224082 1622 ntBASIC14.91□□□□□ -0.02
Ttc3O88196 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ttc3O88196 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ttc3O88196 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ttc3O88196 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Ttc3O88196 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ttc3O88196 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ttc3O88196 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Ttc3O88196 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ttc3O88196 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ttc3O88196 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ttc3O88196 Gm5421-201ENSMUST00000181698 2354 ntBASIC14.91□□□□□ -0.02
Ttc3O88196 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Ttc3O88196 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ttc3O88196 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ttc3O88196 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Ttc3O88196 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Ttc3O88196 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ttc3O88196 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ttc3O88196 Gm15222-202ENSMUST00000228667 1726 ntBASIC14.91□□□□□ -0.02
Ttc3O88196 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ttc3O88196 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Ttc3O88196 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Ttc3O88196 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC14.91□□□□□ -0.02
Ttc3O88196 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ttc3O88196 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Ttc3O88196 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ttc3O88196 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC14.91□□□□□ -0.02
Ttc3O88196 AC155252.1-201ENSMUST00000226462 1208 ntBASIC14.91□□□□□ -0.02
Ttc3O88196 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ttc3O88196 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ttc3O88196 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ttc3O88196 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ttc3O88196 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ttc3O88196 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ttc3O88196 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Ttc3O88196 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Ttc3O88196 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ttc3O88196 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ttc3O88196 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Ttc3O88196 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ttc3O88196 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ttc3O88196 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.9□□□□□ -0.02
Ttc3O88196 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ttc3O88196 Gm12960-201ENSMUST00000120017 1066 ntBASIC14.9□□□□□ -0.02
Ttc3O88196 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ttc3O88196 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ttc3O88196 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ttc3O88196 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC14.9□□□□□ -0.02
Ttc3O88196 AC155729.1-201ENSMUST00000227758 544 ntBASIC14.9□□□□□ -0.02
Ttc3O88196 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ttc3O88196 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Ttc3O88196 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ttc3O88196 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ttc3O88196 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ttc3O88196 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ttc3O88196 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ttc3O88196 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC14.9□□□□□ -0.02
Ttc3O88196 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC14.9□□□□□ -0.02
Ttc3O88196 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ttc3O88196 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ttc3O88196 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ttc3O88196 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Ttc3O88196 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ttc3O88196 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ttc3O88196 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC14.89□□□□□ -0.03
Ttc3O88196 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ttc3O88196 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ttc3O88196 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ttc3O88196 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC14.89□□□□□ -0.03
Ttc3O88196 Ighv1-51-201ENSMUST00000192903 354 ntBASIC14.89□□□□□ -0.03
Ttc3O88196 Gm18905-201ENSMUST00000205454 928 ntBASIC14.89□□□□□ -0.03
Ttc3O88196 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Ttc3O88196 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ttc3O88196 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Ttc3O88196 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
Ttc3O88196 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ttc3O88196 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ttc3O88196 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC14.89□□□□□ -0.03
Ttc3O88196 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ttc3O88196 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
Ttc3O88196 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Ttc3O88196 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ttc3O88196 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC14.89□□□□□ -0.03
Ttc3O88196 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms