Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ubr1O70481 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ubr1O70481 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC18.28■□□□□ 0.52
Ubr1O70481 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ubr1O70481 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ubr1O70481 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ubr1O70481 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ubr1O70481 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ubr1O70481 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ubr1O70481 Gm42693-201ENSMUST00000196779 631 ntBASIC18.27■□□□□ 0.52
Ubr1O70481 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ubr1O70481 Gm18934-201ENSMUST00000216671 1044 ntBASIC18.27■□□□□ 0.52
Ubr1O70481 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ubr1O70481 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ubr1O70481 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ubr1O70481 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC18.27■□□□□ 0.52
Ubr1O70481 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Ubr1O70481 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ubr1O70481 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ubr1O70481 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ubr1O70481 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ubr1O70481 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ubr1O70481 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ubr1O70481 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
Ubr1O70481 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ubr1O70481 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Ubr1O70481 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
Ubr1O70481 Gm22331-201ENSMUST00000158066 136 ntBASIC18.27■□□□□ 0.51
Ubr1O70481 Gm27331-201ENSMUST00000183705 60 ntBASIC18.27■□□□□ 0.51
Ubr1O70481 Gm18054-201ENSMUST00000207539 555 ntBASIC18.27■□□□□ 0.51
Ubr1O70481 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Ubr1O70481 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ubr1O70481 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC18.27■□□□□ 0.51
Ubr1O70481 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ubr1O70481 Gm10040-201ENSMUST00000080726 1662 ntBASIC18.26■□□□□ 0.51
Ubr1O70481 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ubr1O70481 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ubr1O70481 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ubr1O70481 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Ubr1O70481 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ubr1O70481 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ubr1O70481 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC18.26■□□□□ 0.51
Ubr1O70481 AC126253.1-201ENSMUST00000227974 824 ntBASIC18.26■□□□□ 0.51
Ubr1O70481 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ubr1O70481 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ubr1O70481 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ubr1O70481 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ubr1O70481 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
Ubr1O70481 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Ubr1O70481 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ubr1O70481 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ubr1O70481 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ubr1O70481 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ubr1O70481 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ubr1O70481 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Ubr1O70481 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ubr1O70481 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ubr1O70481 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ubr1O70481 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.25■□□□□ 0.51
Ubr1O70481 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
Ubr1O70481 Gm4271-201ENSMUST00000174444 973 ntBASIC18.25■□□□□ 0.51
Ubr1O70481 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ubr1O70481 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ubr1O70481 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC18.25■□□□□ 0.51
Ubr1O70481 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ubr1O70481 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ubr1O70481 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC18.25■□□□□ 0.51
Ubr1O70481 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Ubr1O70481 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ubr1O70481 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ubr1O70481 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ubr1O70481 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC18.25■□□□□ 0.51
Ubr1O70481 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC18.25■□□□□ 0.51
Ubr1O70481 Gm10156-201ENSMUST00000122364 462 ntBASIC18.25■□□□□ 0.51
Ubr1O70481 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC18.25■□□□□ 0.51
Ubr1O70481 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC18.25■□□□□ 0.51
Ubr1O70481 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC18.25■□□□□ 0.51
Ubr1O70481 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ubr1O70481 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ubr1O70481 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ubr1O70481 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ubr1O70481 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ubr1O70481 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ubr1O70481 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ubr1O70481 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ubr1O70481 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ubr1O70481 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ubr1O70481 Gm9768-201ENSMUST00000206007 2861 ntBASIC18.24■□□□□ 0.51
Ubr1O70481 Gm15198-201ENSMUST00000117283 177 ntBASIC18.24■□□□□ 0.51
Ubr1O70481 Gm8213-201ENSMUST00000118191 441 ntBASIC18.24■□□□□ 0.51
Ubr1O70481 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ubr1O70481 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC18.24■□□□□ 0.51
Ubr1O70481 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Ubr1O70481 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ubr1O70481 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC18.24■□□□□ 0.51
Ubr1O70481 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ubr1O70481 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ubr1O70481 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ubr1O70481 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ubr1O70481 Zscan30-202ENSMUST00000224144 1458 ntBASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms