Protein–RNA interactions for Protein: O70137

Alx3, Homeobox protein aristaless-like 3, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx3O70137 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Alx3O70137 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Alx3O70137 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Alx3O70137 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Alx3O70137 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Alx3O70137 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Alx3O70137 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Alx3O70137 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
Alx3O70137 AC154527.4-201ENSMUST00000224364 1667 ntBASIC13.1□□□□□ -0.31
Alx3O70137 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Alx3O70137 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Alx3O70137 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Alx3O70137 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Alx3O70137 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Alx3O70137 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Alx3O70137 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Alx3O70137 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Alx3O70137 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Alx3O70137 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Alx3O70137 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Alx3O70137 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Alx3O70137 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Alx3O70137 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Alx3O70137 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Alx3O70137 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Alx3O70137 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC13.1□□□□□ -0.31
Alx3O70137 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Alx3O70137 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Alx3O70137 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Alx3O70137 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Alx3O70137 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Alx3O70137 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Alx3O70137 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Alx3O70137 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Alx3O70137 Gm43061-201ENSMUST00000198850 2241 ntBASIC13.09□□□□□ -0.31
Alx3O70137 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Alx3O70137 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Alx3O70137 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Alx3O70137 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Alx3O70137 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Alx3O70137 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC13.09□□□□□ -0.31
Alx3O70137 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Alx3O70137 Gm20825-201ENSMUST00000178149 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Alx3O70137 Gm28707-201ENSMUST00000186134 558 ntTSL 3 BASIC13.09□□□□□ -0.31
Alx3O70137 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC13.09□□□□□ -0.31
Alx3O70137 Gm30238-201ENSMUST00000195528 2603 ntBASIC13.09□□□□□ -0.31
Alx3O70137 Gm42726-201ENSMUST00000202274 1286 ntTSL 5 BASIC13.09□□□□□ -0.31
Alx3O70137 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC13.09□□□□□ -0.31
Alx3O70137 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Alx3O70137 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Alx3O70137 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
Alx3O70137 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
Alx3O70137 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC13.09□□□□□ -0.31
Alx3O70137 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC13.09□□□□□ -0.31
Alx3O70137 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
Alx3O70137 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Alx3O70137 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Alx3O70137 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Alx3O70137 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.09□□□□□ -0.31
Alx3O70137 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Alx3O70137 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Alx3O70137 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC13.09□□□□□ -0.31
Alx3O70137 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Alx3O70137 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Alx3O70137 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Alx3O70137 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC13.08□□□□□ -0.31
Alx3O70137 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.08□□□□□ -0.31
Alx3O70137 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Alx3O70137 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Alx3O70137 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13.08□□□□□ -0.32
Alx3O70137 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Alx3O70137 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Alx3O70137 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Alx3O70137 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Alx3O70137 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.08□□□□□ -0.32
Alx3O70137 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
Alx3O70137 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Alx3O70137 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Alx3O70137 Gm43056-201ENSMUST00000197865 2791 ntBASIC13.08□□□□□ -0.32
Alx3O70137 AC126250.1-201ENSMUST00000228343 1768 ntBASIC13.08□□□□□ -0.32
Alx3O70137 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Alx3O70137 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Alx3O70137 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC13.08□□□□□ -0.32
Alx3O70137 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Alx3O70137 Gm25925-201ENSMUST00000158314 306 ntBASIC13.08□□□□□ -0.32
Alx3O70137 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Alx3O70137 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Alx3O70137 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Alx3O70137 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC13.08□□□□□ -0.32
Alx3O70137 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC13.08□□□□□ -0.32
Alx3O70137 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Alx3O70137 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC13.08□□□□□ -0.32
Alx3O70137 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Alx3O70137 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Alx3O70137 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Alx3O70137 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Alx3O70137 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.08□□□□□ -0.32
Alx3O70137 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Alx3O70137 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Alx3O70137 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms