Protein–RNA interactions for Protein: O55203

Ldb2, LIM domain-binding protein 2, mousemouse

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb2O55203 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC14.27□□□□□ -0.13
Ldb2O55203 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ldb2O55203 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ldb2O55203 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ldb2O55203 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ldb2O55203 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ldb2O55203 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ldb2O55203 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ldb2O55203 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ldb2O55203 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ldb2O55203 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ldb2O55203 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ldb2O55203 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ldb2O55203 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ldb2O55203 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ldb2O55203 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ldb2O55203 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC14.26□□□□□ -0.13
Ldb2O55203 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ldb2O55203 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Ldb2O55203 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ldb2O55203 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ldb2O55203 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ldb2O55203 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ldb2O55203 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ldb2O55203 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ldb2O55203 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ldb2O55203 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ldb2O55203 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC14.26□□□□□ -0.13
Ldb2O55203 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC14.26□□□□□ -0.13
Ldb2O55203 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14.26□□□□□ -0.13
Ldb2O55203 Gm12882-201ENSMUST00000121696 517 ntBASIC14.26□□□□□ -0.13
Ldb2O55203 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ldb2O55203 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC14.26□□□□□ -0.13
Ldb2O55203 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC14.26□□□□□ -0.13
Ldb2O55203 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ldb2O55203 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ldb2O55203 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.26□□□□□ -0.13
Ldb2O55203 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC14.26□□□□□ -0.13
Ldb2O55203 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ldb2O55203 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC14.26□□□□□ -0.13
Ldb2O55203 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ldb2O55203 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Ldb2O55203 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ldb2O55203 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ldb2O55203 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ldb2O55203 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC14.26□□□□□ -0.13
Ldb2O55203 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ldb2O55203 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ldb2O55203 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC14.25□□□□□ -0.13
Ldb2O55203 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ldb2O55203 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ldb2O55203 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ldb2O55203 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ldb2O55203 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ldb2O55203 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Ldb2O55203 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ldb2O55203 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ldb2O55203 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ldb2O55203 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Ldb2O55203 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC14.25□□□□□ -0.13
Ldb2O55203 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC14.25□□□□□ -0.13
Ldb2O55203 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC14.25□□□□□ -0.13
Ldb2O55203 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ldb2O55203 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ldb2O55203 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ldb2O55203 Gm18766-201ENSMUST00000189811 808 ntBASIC14.25□□□□□ -0.13
Ldb2O55203 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ldb2O55203 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Ldb2O55203 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ldb2O55203 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ldb2O55203 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ldb2O55203 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ldb2O55203 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ldb2O55203 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ldb2O55203 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Ldb2O55203 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ldb2O55203 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.25□□□□□ -0.13
Ldb2O55203 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ldb2O55203 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ldb2O55203 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ldb2O55203 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Ldb2O55203 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ldb2O55203 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ldb2O55203 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ldb2O55203 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ldb2O55203 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ldb2O55203 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ldb2O55203 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ldb2O55203 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Ldb2O55203 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ldb2O55203 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ldb2O55203 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ldb2O55203 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ldb2O55203 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
Ldb2O55203 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC14.24□□□□□ -0.13
Ldb2O55203 Gm5312-201ENSMUST00000203728 547 ntBASIC14.24□□□□□ -0.13
Ldb2O55203 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC14.24□□□□□ -0.13
Ldb2O55203 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Ldb2O55203 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ldb2O55203 Gm8396-201ENSMUST00000057361 823 ntBASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms