Protein–RNA interactions for Protein: O35704

Sptlc1, Serine palmitoyltransferase 1, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptlc1O35704 Gm5797-201ENSMUST00000100886 997 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sptlc1O35704 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Sptlc1O35704 Gm3149-201ENSMUST00000112779 997 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Sptlc1O35704 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Sptlc1O35704 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sptlc1O35704 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC15.78■□□□□ 0.12
Sptlc1O35704 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Sptlc1O35704 Gm8362-202ENSMUST00000170673 997 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Sptlc1O35704 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Sptlc1O35704 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC15.78■□□□□ 0.12
Sptlc1O35704 AC154239.3-201ENSMUST00000226933 674 ntBASIC15.78■□□□□ 0.12
Sptlc1O35704 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
Sptlc1O35704 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Sptlc1O35704 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Sptlc1O35704 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Sptlc1O35704 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sptlc1O35704 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sptlc1O35704 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sptlc1O35704 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Sptlc1O35704 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sptlc1O35704 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sptlc1O35704 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC15.78■□□□□ 0.12
Sptlc1O35704 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sptlc1O35704 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sptlc1O35704 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Sptlc1O35704 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sptlc1O35704 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sptlc1O35704 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sptlc1O35704 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Sptlc1O35704 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sptlc1O35704 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sptlc1O35704 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Sptlc1O35704 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sptlc1O35704 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Sptlc1O35704 Gm45667-201ENSMUST00000210380 1316 ntBASIC15.77■□□□□ 0.12
Sptlc1O35704 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.77■□□□□ 0.12
Sptlc1O35704 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Sptlc1O35704 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sptlc1O35704 Gm9252-201ENSMUST00000172364 1602 ntBASIC15.77■□□□□ 0.12
Sptlc1O35704 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sptlc1O35704 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sptlc1O35704 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC15.77■□□□□ 0.12
Sptlc1O35704 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sptlc1O35704 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC15.77■□□□□ 0.12
Sptlc1O35704 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
Sptlc1O35704 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Sptlc1O35704 Gm23984-201ENSMUST00000157139 203 ntBASIC15.77■□□□□ 0.12
Sptlc1O35704 9430065F17Rik-202ENSMUST00000180908 1084 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Sptlc1O35704 Gm10766-202ENSMUST00000194123 606 ntBASIC15.77■□□□□ 0.12
Sptlc1O35704 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Sptlc1O35704 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC15.77■□□□□ 0.12
Sptlc1O35704 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Sptlc1O35704 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC15.77■□□□□ 0.12
Sptlc1O35704 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Sptlc1O35704 AC121598.1-201ENSMUST00000228224 1019 ntBASIC15.77■□□□□ 0.12
Sptlc1O35704 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Sptlc1O35704 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sptlc1O35704 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Sptlc1O35704 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC15.77■□□□□ 0.11
Sptlc1O35704 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Sptlc1O35704 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Sptlc1O35704 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Sptlc1O35704 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Sptlc1O35704 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Sptlc1O35704 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Sptlc1O35704 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Sptlc1O35704 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sptlc1O35704 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sptlc1O35704 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sptlc1O35704 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sptlc1O35704 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Sptlc1O35704 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sptlc1O35704 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Sptlc1O35704 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sptlc1O35704 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Sptlc1O35704 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sptlc1O35704 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sptlc1O35704 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Sptlc1O35704 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sptlc1O35704 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Sptlc1O35704 Gm15074-201ENSMUST00000117603 936 ntBASIC15.76■□□□□ 0.11
Sptlc1O35704 Defa-ps4-201ENSMUST00000118021 183 ntBASIC15.76■□□□□ 0.11
Sptlc1O35704 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Sptlc1O35704 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Sptlc1O35704 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC15.76■□□□□ 0.11
Sptlc1O35704 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
Sptlc1O35704 Gm6745-201ENSMUST00000199216 526 ntBASIC15.76■□□□□ 0.11
Sptlc1O35704 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Sptlc1O35704 Gm9797-201ENSMUST00000052902 613 ntBASIC15.76■□□□□ 0.11
Sptlc1O35704 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Sptlc1O35704 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Sptlc1O35704 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sptlc1O35704 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sptlc1O35704 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sptlc1O35704 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sptlc1O35704 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sptlc1O35704 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sptlc1O35704 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
Sptlc1O35704 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
Sptlc1O35704 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms