Protein–RNA interactions for Protein: O35449

Prrt1, Proline-rich transmembrane protein 1, mousemouse

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prrt1O35449 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Prrt1O35449 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Prrt1O35449 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Prrt1O35449 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Prrt1O35449 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Prrt1O35449 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Prrt1O35449 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Prrt1O35449 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Prrt1O35449 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Prrt1O35449 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Prrt1O35449 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC12.12□□□□□ -0.47
Prrt1O35449 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Prrt1O35449 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Prrt1O35449 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Prrt1O35449 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Prrt1O35449 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Prrt1O35449 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prrt1O35449 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prrt1O35449 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prrt1O35449 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prrt1O35449 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prrt1O35449 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prrt1O35449 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prrt1O35449 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.11□□□□□ -0.47
Prrt1O35449 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prrt1O35449 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prrt1O35449 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prrt1O35449 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prrt1O35449 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prrt1O35449 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Prrt1O35449 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Prrt1O35449 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Prrt1O35449 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prrt1O35449 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prrt1O35449 Gm15593-201ENSMUST00000122085 1008 ntBASIC12.11□□□□□ -0.47
Prrt1O35449 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prrt1O35449 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Prrt1O35449 Gm8584-201ENSMUST00000171982 758 ntBASIC12.11□□□□□ -0.47
Prrt1O35449 Gm27646-201ENSMUST00000183989 110 ntBASIC12.11□□□□□ -0.47
Prrt1O35449 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC12.11□□□□□ -0.47
Prrt1O35449 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC12.11□□□□□ -0.47
Prrt1O35449 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC12.11□□□□□ -0.47
Prrt1O35449 AC151836.1-202ENSMUST00000226259 753 ntBASIC12.11□□□□□ -0.47
Prrt1O35449 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prrt1O35449 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Prrt1O35449 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prrt1O35449 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prrt1O35449 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prrt1O35449 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prrt1O35449 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prrt1O35449 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prrt1O35449 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Prrt1O35449 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prrt1O35449 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC12.1□□□□□ -0.47
Prrt1O35449 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Prrt1O35449 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Prrt1O35449 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC12.1□□□□□ -0.47
Prrt1O35449 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Prrt1O35449 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Prrt1O35449 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Prrt1O35449 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Prrt1O35449 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Prrt1O35449 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Prrt1O35449 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Prrt1O35449 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Prrt1O35449 Gm13464-201ENSMUST00000119418 935 ntBASIC12.1□□□□□ -0.47
Prrt1O35449 Gm13836-201ENSMUST00000121159 501 ntBASIC12.1□□□□□ -0.47
Prrt1O35449 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Prrt1O35449 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Prrt1O35449 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC12.1□□□□□ -0.47
Prrt1O35449 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
Prrt1O35449 Gm6296-201ENSMUST00000222599 943 ntBASIC12.1□□□□□ -0.47
Prrt1O35449 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Prrt1O35449 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Prrt1O35449 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Prrt1O35449 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Prrt1O35449 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Prrt1O35449 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Prrt1O35449 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Prrt1O35449 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Prrt1O35449 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Prrt1O35449 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Prrt1O35449 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Prrt1O35449 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Prrt1O35449 Il17rd-203ENSMUST00000225146 3366 ntBASIC12.1□□□□□ -0.47
Prrt1O35449 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Prrt1O35449 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Prrt1O35449 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.1□□□□□ -0.47
Prrt1O35449 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Prrt1O35449 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
Prrt1O35449 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Prrt1O35449 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Prrt1O35449 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Prrt1O35449 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Prrt1O35449 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Prrt1O35449 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Prrt1O35449 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Prrt1O35449 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Prrt1O35449 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Prrt1O35449 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms