Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC13.5□□□□□ -0.25
Cx3cl1O35188 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC13.5□□□□□ -0.25
Cx3cl1O35188 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC13.5□□□□□ -0.25
Cx3cl1O35188 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cx3cl1O35188 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cx3cl1O35188 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Cx3cl1O35188 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cx3cl1O35188 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cx3cl1O35188 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cx3cl1O35188 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cx3cl1O35188 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cx3cl1O35188 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cx3cl1O35188 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC13.49□□□□□ -0.25
Cx3cl1O35188 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.49□□□□□ -0.25
Cx3cl1O35188 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cx3cl1O35188 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cx3cl1O35188 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.49□□□□□ -0.25
Cx3cl1O35188 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cx3cl1O35188 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cx3cl1O35188 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Cx3cl1O35188 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cx3cl1O35188 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cx3cl1O35188 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cx3cl1O35188 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cx3cl1O35188 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
Cx3cl1O35188 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cx3cl1O35188 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cx3cl1O35188 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cx3cl1O35188 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC13.49□□□□□ -0.25
Cx3cl1O35188 Gm13015-201ENSMUST00000118674 204 ntBASIC13.49□□□□□ -0.25
Cx3cl1O35188 Gm6539-201ENSMUST00000119157 1064 ntBASIC13.49□□□□□ -0.25
Cx3cl1O35188 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC13.49□□□□□ -0.25
Cx3cl1O35188 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC13.49□□□□□ -0.25
Cx3cl1O35188 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC13.49□□□□□ -0.25
Cx3cl1O35188 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cx3cl1O35188 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cx3cl1O35188 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cx3cl1O35188 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Cx3cl1O35188 Gm43509-201ENSMUST00000196551 2594 ntBASIC13.49□□□□□ -0.25
Cx3cl1O35188 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cx3cl1O35188 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Cx3cl1O35188 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cx3cl1O35188 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.49□□□□□ -0.25
Cx3cl1O35188 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Cx3cl1O35188 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cx3cl1O35188 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cx3cl1O35188 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cx3cl1O35188 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cx3cl1O35188 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cx3cl1O35188 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cx3cl1O35188 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cx3cl1O35188 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cx3cl1O35188 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC13.48□□□□□ -0.25
Cx3cl1O35188 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cx3cl1O35188 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cx3cl1O35188 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC13.48□□□□□ -0.25
Cx3cl1O35188 Fgf17-202ENSMUST00000227123 1336 ntBASIC13.48□□□□□ -0.25
Cx3cl1O35188 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cx3cl1O35188 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cx3cl1O35188 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
Cx3cl1O35188 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Cx3cl1O35188 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Cx3cl1O35188 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC13.48□□□□□ -0.25
Cx3cl1O35188 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC13.48□□□□□ -0.25
Cx3cl1O35188 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cx3cl1O35188 Gm5779-201ENSMUST00000218467 910 ntBASIC13.48□□□□□ -0.25
Cx3cl1O35188 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Cx3cl1O35188 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cx3cl1O35188 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC13.48□□□□□ -0.25
Cx3cl1O35188 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cx3cl1O35188 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cx3cl1O35188 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cx3cl1O35188 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cx3cl1O35188 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cx3cl1O35188 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cx3cl1O35188 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Cx3cl1O35188 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Cx3cl1O35188 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cx3cl1O35188 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cx3cl1O35188 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Cx3cl1O35188 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cx3cl1O35188 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cx3cl1O35188 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC13.47□□□□□ -0.25
Cx3cl1O35188 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cx3cl1O35188 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cx3cl1O35188 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cx3cl1O35188 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Cx3cl1O35188 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cx3cl1O35188 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cx3cl1O35188 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cx3cl1O35188 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Cx3cl1O35188 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cx3cl1O35188 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cx3cl1O35188 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cx3cl1O35188 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cx3cl1O35188 Gm25948-201ENSMUST00000175334 112 ntBASIC13.47□□□□□ -0.25
Cx3cl1O35188 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cx3cl1O35188 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC13.47□□□□□ -0.25
Cx3cl1O35188 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cx3cl1O35188 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms