Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC12.8□□□□□ -0.36
Alx4O35137 Ank2-226ENSMUST00000189368 339 ntBASIC12.8□□□□□ -0.36
Alx4O35137 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Alx4O35137 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC12.8□□□□□ -0.36
Alx4O35137 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Alx4O35137 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC12.8□□□□□ -0.36
Alx4O35137 AC131709.1-201ENSMUST00000224731 1180 ntBASIC12.8□□□□□ -0.36
Alx4O35137 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Alx4O35137 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Alx4O35137 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Alx4O35137 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Alx4O35137 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.8□□□□□ -0.36
Alx4O35137 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Alx4O35137 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Alx4O35137 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Alx4O35137 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Alx4O35137 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC12.8□□□□□ -0.36
Alx4O35137 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC12.8□□□□□ -0.36
Alx4O35137 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Alx4O35137 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Alx4O35137 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Alx4O35137 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Alx4O35137 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Alx4O35137 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Alx4O35137 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Alx4O35137 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Alx4O35137 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Alx4O35137 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Alx4O35137 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Alx4O35137 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Alx4O35137 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Alx4O35137 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Alx4O35137 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC12.79□□□□□ -0.36
Alx4O35137 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Alx4O35137 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC12.79□□□□□ -0.36
Alx4O35137 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC12.79□□□□□ -0.36
Alx4O35137 AC131690.1-201ENSMUST00000218406 374 ntBASIC12.79□□□□□ -0.36
Alx4O35137 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC12.79□□□□□ -0.36
Alx4O35137 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC12.79□□□□□ -0.36
Alx4O35137 Gm10154-201ENSMUST00000084445 354 ntBASIC12.79□□□□□ -0.36
Alx4O35137 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC12.79□□□□□ -0.36
Alx4O35137 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Alx4O35137 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Alx4O35137 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Alx4O35137 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Alx4O35137 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC12.79□□□□□ -0.36
Alx4O35137 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Alx4O35137 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Alx4O35137 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Alx4O35137 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Alx4O35137 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Alx4O35137 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Alx4O35137 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Alx4O35137 AC121801.1-201ENSMUST00000225363 1899 ntBASIC12.78□□□□□ -0.36
Alx4O35137 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Alx4O35137 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Alx4O35137 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Alx4O35137 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Alx4O35137 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Alx4O35137 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Alx4O35137 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Alx4O35137 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Alx4O35137 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Alx4O35137 Gm13036-201ENSMUST00000117799 748 ntBASIC12.78□□□□□ -0.36
Alx4O35137 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Alx4O35137 Gm5479-201ENSMUST00000160578 435 ntBASIC12.78□□□□□ -0.36
Alx4O35137 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Alx4O35137 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Alx4O35137 Gm27300-201ENSMUST00000184085 97 ntBASIC12.78□□□□□ -0.36
Alx4O35137 Gm27335-201ENSMUST00000184758 97 ntBASIC12.78□□□□□ -0.36
Alx4O35137 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC12.78□□□□□ -0.36
Alx4O35137 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Alx4O35137 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Alx4O35137 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Alx4O35137 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Alx4O35137 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Alx4O35137 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Alx4O35137 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Alx4O35137 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Alx4O35137 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Alx4O35137 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Alx4O35137 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC12.78□□□□□ -0.36
Alx4O35137 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Alx4O35137 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Alx4O35137 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Alx4O35137 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Alx4O35137 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Alx4O35137 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Alx4O35137 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Alx4O35137 Matn2-206ENSMUST00000228570 2798 ntBASIC12.77□□□□□ -0.36
Alx4O35137 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Alx4O35137 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Alx4O35137 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Alx4O35137 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Alx4O35137 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Alx4O35137 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Alx4O35137 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Alx4O35137 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Alx4O35137 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Alx4O35137 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms