Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Shisa8J3QNX5 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC13.09□□□□□ -0.31
Shisa8J3QNX5 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Shisa8J3QNX5 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shisa8J3QNX5 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shisa8J3QNX5 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shisa8J3QNX5 Gm25990-201ENSMUST00000102440 86 ntBASIC13.09□□□□□ -0.31
Shisa8J3QNX5 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shisa8J3QNX5 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Shisa8J3QNX5 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Shisa8J3QNX5 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Shisa8J3QNX5 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Shisa8J3QNX5 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
Shisa8J3QNX5 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Shisa8J3QNX5 Mypopos-202ENSMUST00000205975 2321 ntBASIC13.09□□□□□ -0.31
Shisa8J3QNX5 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Shisa8J3QNX5 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shisa8J3QNX5 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shisa8J3QNX5 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shisa8J3QNX5 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shisa8J3QNX5 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shisa8J3QNX5 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.09□□□□□ -0.31
Shisa8J3QNX5 AC131743.5-201ENSMUST00000220775 1618 ntBASIC13.09□□□□□ -0.31
Shisa8J3QNX5 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Shisa8J3QNX5 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Shisa8J3QNX5 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shisa8J3QNX5 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shisa8J3QNX5 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shisa8J3QNX5 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shisa8J3QNX5 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
Shisa8J3QNX5 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Shisa8J3QNX5 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13.08□□□□□ -0.31
Shisa8J3QNX5 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Shisa8J3QNX5 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
Shisa8J3QNX5 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Shisa8J3QNX5 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Shisa8J3QNX5 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Shisa8J3QNX5 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Shisa8J3QNX5 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Shisa8J3QNX5 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.08□□□□□ -0.32
Shisa8J3QNX5 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.08□□□□□ -0.32
Shisa8J3QNX5 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Shisa8J3QNX5 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Shisa8J3QNX5 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Shisa8J3QNX5 Gm14859-201ENSMUST00000117752 357 ntBASIC13.08□□□□□ -0.32
Shisa8J3QNX5 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Shisa8J3QNX5 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC13.08□□□□□ -0.32
Shisa8J3QNX5 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Shisa8J3QNX5 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC13.08□□□□□ -0.32
Shisa8J3QNX5 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Shisa8J3QNX5 Gm4691-201ENSMUST00000182339 1000 ntBASIC13.08□□□□□ -0.32
Shisa8J3QNX5 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC13.08□□□□□ -0.32
Shisa8J3QNX5 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Shisa8J3QNX5 Gm2451-201ENSMUST00000199447 999 ntBASIC13.08□□□□□ -0.32
Shisa8J3QNX5 Gm10290-201ENSMUST00000200451 999 ntBASIC13.08□□□□□ -0.32
Shisa8J3QNX5 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC13.08□□□□□ -0.32
Shisa8J3QNX5 Gm7787-201ENSMUST00000216858 688 ntBASIC13.08□□□□□ -0.32
Shisa8J3QNX5 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Shisa8J3QNX5 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Shisa8J3QNX5 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Shisa8J3QNX5 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Shisa8J3QNX5 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Shisa8J3QNX5 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Shisa8J3QNX5 AC119177.1-201ENSMUST00000227647 1332 ntBASIC13.08□□□□□ -0.32
Shisa8J3QNX5 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Shisa8J3QNX5 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Shisa8J3QNX5 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Shisa8J3QNX5 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Shisa8J3QNX5 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Shisa8J3QNX5 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shisa8J3QNX5 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.07□□□□□ -0.32
Shisa8J3QNX5 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shisa8J3QNX5 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shisa8J3QNX5 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Shisa8J3QNX5 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Shisa8J3QNX5 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Shisa8J3QNX5 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shisa8J3QNX5 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shisa8J3QNX5 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shisa8J3QNX5 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
Shisa8J3QNX5 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Shisa8J3QNX5 Gm4899-201ENSMUST00000178708 719 ntBASIC13.07□□□□□ -0.32
Shisa8J3QNX5 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Shisa8J3QNX5 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shisa8J3QNX5 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shisa8J3QNX5 AC121801.1-201ENSMUST00000225363 1899 ntBASIC13.07□□□□□ -0.32
Shisa8J3QNX5 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shisa8J3QNX5 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Shisa8J3QNX5 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Shisa8J3QNX5 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shisa8J3QNX5 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.07□□□□□ -0.32
Shisa8J3QNX5 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shisa8J3QNX5 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shisa8J3QNX5 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Shisa8J3QNX5 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shisa8J3QNX5 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shisa8J3QNX5 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC13.07□□□□□ -0.32
Shisa8J3QNX5 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shisa8J3QNX5 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.07□□□□□ -0.32
Shisa8J3QNX5 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms