Protein–RNA interactions for Protein: E9PZM7

Scaf11, SR-related CTD-associated factor 11, mousemouse

Known RBP Predictions only

Length 1,456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11E9PZM7 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scaf11E9PZM7 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scaf11E9PZM7 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scaf11E9PZM7 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scaf11E9PZM7 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scaf11E9PZM7 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Scaf11E9PZM7 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Scaf11E9PZM7 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC19.68■□□□□ 0.74
Scaf11E9PZM7 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scaf11E9PZM7 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC19.68■□□□□ 0.74
Scaf11E9PZM7 Gm18027-201ENSMUST00000218947 619 ntBASIC19.68■□□□□ 0.74
Scaf11E9PZM7 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Scaf11E9PZM7 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Scaf11E9PZM7 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scaf11E9PZM7 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Scaf11E9PZM7 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
Scaf11E9PZM7 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC19.68■□□□□ 0.74
Scaf11E9PZM7 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scaf11E9PZM7 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scaf11E9PZM7 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scaf11E9PZM7 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scaf11E9PZM7 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Scaf11E9PZM7 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scaf11E9PZM7 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Scaf11E9PZM7 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Scaf11E9PZM7 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC19.67■□□□□ 0.74
Scaf11E9PZM7 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC19.67■□□□□ 0.74
Scaf11E9PZM7 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC19.67■□□□□ 0.74
Scaf11E9PZM7 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
Scaf11E9PZM7 Gm27772-201ENSMUST00000184900 187 ntBASIC19.67■□□□□ 0.74
Scaf11E9PZM7 Gm29396-201ENSMUST00000185659 716 ntBASIC19.67■□□□□ 0.74
Scaf11E9PZM7 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scaf11E9PZM7 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scaf11E9PZM7 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scaf11E9PZM7 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Scaf11E9PZM7 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scaf11E9PZM7 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scaf11E9PZM7 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scaf11E9PZM7 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Scaf11E9PZM7 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Scaf11E9PZM7 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Scaf11E9PZM7 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC19.67■□□□□ 0.74
Scaf11E9PZM7 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Scaf11E9PZM7 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scaf11E9PZM7 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scaf11E9PZM7 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Scaf11E9PZM7 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scaf11E9PZM7 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scaf11E9PZM7 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scaf11E9PZM7 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Scaf11E9PZM7 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Scaf11E9PZM7 Snora73a-201ENSMUST00000082453 205 ntBASIC19.67■□□□□ 0.74
Scaf11E9PZM7 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC19.66■□□□□ 0.74
Scaf11E9PZM7 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scaf11E9PZM7 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Scaf11E9PZM7 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC19.66■□□□□ 0.74
Scaf11E9PZM7 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC19.66■□□□□ 0.74
Scaf11E9PZM7 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scaf11E9PZM7 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Scaf11E9PZM7 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scaf11E9PZM7 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scaf11E9PZM7 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scaf11E9PZM7 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scaf11E9PZM7 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scaf11E9PZM7 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC19.66■□□□□ 0.74
Scaf11E9PZM7 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Scaf11E9PZM7 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Scaf11E9PZM7 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Scaf11E9PZM7 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC19.66■□□□□ 0.74
Scaf11E9PZM7 Gm44608-201ENSMUST00000206827 855 ntBASIC19.66■□□□□ 0.74
Scaf11E9PZM7 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Scaf11E9PZM7 Gm9954-202ENSMUST00000198686 4725 ntBASIC19.66■□□□□ 0.74
Scaf11E9PZM7 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scaf11E9PZM7 Gm6203-201ENSMUST00000209575 1342 ntBASIC19.66■□□□□ 0.74
Scaf11E9PZM7 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Scaf11E9PZM7 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Scaf11E9PZM7 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Scaf11E9PZM7 Gm44207-201ENSMUST00000204568 1424 ntBASIC19.65■□□□□ 0.74
Scaf11E9PZM7 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Scaf11E9PZM7 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Scaf11E9PZM7 AC113441.2-201ENSMUST00000221538 1468 ntBASIC19.65■□□□□ 0.74
Scaf11E9PZM7 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Scaf11E9PZM7 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Scaf11E9PZM7 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Scaf11E9PZM7 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Scaf11E9PZM7 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Scaf11E9PZM7 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Scaf11E9PZM7 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Scaf11E9PZM7 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Scaf11E9PZM7 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Scaf11E9PZM7 Gm12241-201ENSMUST00000118330 726 ntBASIC19.65■□□□□ 0.74
Scaf11E9PZM7 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Scaf11E9PZM7 Gm7118-201ENSMUST00000200167 1003 ntBASIC19.65■□□□□ 0.74
Scaf11E9PZM7 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Scaf11E9PZM7 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC19.65■□□□□ 0.74
Scaf11E9PZM7 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC19.65■□□□□ 0.74
Scaf11E9PZM7 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Scaf11E9PZM7 Gm5620-201ENSMUST00000077991 1348 ntBASIC19.65■□□□□ 0.74
Scaf11E9PZM7 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Scaf11E9PZM7 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms