Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC12.83□□□□□ -0.36
Shank1D3YZU1 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Shank1D3YZU1 Gm8399-201ENSMUST00000082300 1117 ntBASIC12.83□□□□□ -0.36
Shank1D3YZU1 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Shank1D3YZU1 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Shank1D3YZU1 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Shank1D3YZU1 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Shank1D3YZU1 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Shank1D3YZU1 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Shank1D3YZU1 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Shank1D3YZU1 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Shank1D3YZU1 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Shank1D3YZU1 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Shank1D3YZU1 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Shank1D3YZU1 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Shank1D3YZU1 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Shank1D3YZU1 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Shank1D3YZU1 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC12.83□□□□□ -0.36
Shank1D3YZU1 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Shank1D3YZU1 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC12.83□□□□□ -0.36
Shank1D3YZU1 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Shank1D3YZU1 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Shank1D3YZU1 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC12.83□□□□□ -0.36
Shank1D3YZU1 AC139580.1-202ENSMUST00000223574 928 ntBASIC12.83□□□□□ -0.36
Shank1D3YZU1 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC12.83□□□□□ -0.36
Shank1D3YZU1 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Shank1D3YZU1 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Shank1D3YZU1 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Shank1D3YZU1 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC12.82□□□□□ -0.36
Shank1D3YZU1 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Shank1D3YZU1 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC12.82□□□□□ -0.36
Shank1D3YZU1 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Shank1D3YZU1 Gm45667-201ENSMUST00000210380 1316 ntBASIC12.82□□□□□ -0.36
Shank1D3YZU1 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Shank1D3YZU1 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC12.82□□□□□ -0.36
Shank1D3YZU1 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.82□□□□□ -0.36
Shank1D3YZU1 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Shank1D3YZU1 Gm6916-202ENSMUST00000205523 195 ntBASIC12.82□□□□□ -0.36
Shank1D3YZU1 AC121598.1-201ENSMUST00000228224 1019 ntBASIC12.82□□□□□ -0.36
Shank1D3YZU1 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Shank1D3YZU1 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Shank1D3YZU1 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Shank1D3YZU1 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Shank1D3YZU1 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Shank1D3YZU1 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Shank1D3YZU1 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Shank1D3YZU1 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Shank1D3YZU1 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Shank1D3YZU1 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Shank1D3YZU1 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Shank1D3YZU1 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Shank1D3YZU1 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Shank1D3YZU1 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC12.82□□□□□ -0.36
Shank1D3YZU1 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC12.81□□□□□ -0.36
Shank1D3YZU1 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Shank1D3YZU1 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC12.81□□□□□ -0.36
Shank1D3YZU1 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Shank1D3YZU1 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Shank1D3YZU1 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Shank1D3YZU1 Gm45412-201ENSMUST00000210217 2275 ntBASIC12.81□□□□□ -0.36
Shank1D3YZU1 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Shank1D3YZU1 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Shank1D3YZU1 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Shank1D3YZU1 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Shank1D3YZU1 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Shank1D3YZU1 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Shank1D3YZU1 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Shank1D3YZU1 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Shank1D3YZU1 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Shank1D3YZU1 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Shank1D3YZU1 Gm14452-201ENSMUST00000118680 1632 ntBASIC12.81□□□□□ -0.36
Shank1D3YZU1 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Shank1D3YZU1 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Shank1D3YZU1 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Shank1D3YZU1 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Shank1D3YZU1 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Shank1D3YZU1 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC12.81□□□□□ -0.36
Shank1D3YZU1 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Shank1D3YZU1 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Shank1D3YZU1 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Shank1D3YZU1 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Shank1D3YZU1 Gm28911-201ENSMUST00000188837 117 ntBASIC12.81□□□□□ -0.36
Shank1D3YZU1 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC12.81□□□□□ -0.36
Shank1D3YZU1 Olfr286-202ENSMUST00000205305 969 ntBASIC12.81□□□□□ -0.36
Shank1D3YZU1 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.81□□□□□ -0.36
Shank1D3YZU1 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Shank1D3YZU1 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Shank1D3YZU1 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Shank1D3YZU1 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Shank1D3YZU1 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Shank1D3YZU1 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Shank1D3YZU1 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Shank1D3YZU1 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Shank1D3YZU1 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Shank1D3YZU1 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Shank1D3YZU1 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Shank1D3YZU1 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Shank1D3YZU1 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Shank1D3YZU1 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Shank1D3YZU1 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms