Protein–RNA interactions for Protein: C0HKE2

Hist1h2ac, Histone H2A type 1-C, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h2acC0HKE2 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hist1h2acC0HKE2 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Hist1h2acC0HKE2 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Hist1h2acC0HKE2 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC13.15□□□□□ -0.3
Hist1h2acC0HKE2 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC13.15□□□□□ -0.3
Hist1h2acC0HKE2 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hist1h2acC0HKE2 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hist1h2acC0HKE2 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Hist1h2acC0HKE2 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hist1h2acC0HKE2 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Hist1h2acC0HKE2 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.15□□□□□ -0.3
Hist1h2acC0HKE2 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hist1h2acC0HKE2 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hist1h2acC0HKE2 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hist1h2acC0HKE2 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Hist1h2acC0HKE2 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Hist1h2acC0HKE2 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Hist1h2acC0HKE2 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Hist1h2acC0HKE2 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hist1h2acC0HKE2 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hist1h2acC0HKE2 Gm13233-201ENSMUST00000118760 1443 ntBASIC13.14□□□□□ -0.31
Hist1h2acC0HKE2 Gm13244-201ENSMUST00000118855 1446 ntBASIC13.14□□□□□ -0.31
Hist1h2acC0HKE2 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hist1h2acC0HKE2 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC13.14□□□□□ -0.31
Hist1h2acC0HKE2 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hist1h2acC0HKE2 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Hist1h2acC0HKE2 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hist1h2acC0HKE2 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hist1h2acC0HKE2 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Hist1h2acC0HKE2 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hist1h2acC0HKE2 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hist1h2acC0HKE2 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Hist1h2acC0HKE2 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Hist1h2acC0HKE2 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC13.14□□□□□ -0.31
Hist1h2acC0HKE2 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC13.14□□□□□ -0.31
Hist1h2acC0HKE2 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hist1h2acC0HKE2 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Hist1h2acC0HKE2 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Hist1h2acC0HKE2 AC133598.3-202ENSMUST00000224219 531 ntBASIC13.14□□□□□ -0.31
Hist1h2acC0HKE2 AC155729.1-201ENSMUST00000227758 544 ntBASIC13.14□□□□□ -0.31
Hist1h2acC0HKE2 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hist1h2acC0HKE2 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC13.14□□□□□ -0.31
Hist1h2acC0HKE2 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC13.14□□□□□ -0.31
Hist1h2acC0HKE2 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hist1h2acC0HKE2 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hist1h2acC0HKE2 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC13.14□□□□□ -0.31
Hist1h2acC0HKE2 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Hist1h2acC0HKE2 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hist1h2acC0HKE2 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Hist1h2acC0HKE2 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Hist1h2acC0HKE2 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Hist1h2acC0HKE2 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hist1h2acC0HKE2 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hist1h2acC0HKE2 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hist1h2acC0HKE2 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC13.13□□□□□ -0.31
Hist1h2acC0HKE2 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Hist1h2acC0HKE2 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Hist1h2acC0HKE2 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hist1h2acC0HKE2 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hist1h2acC0HKE2 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Hist1h2acC0HKE2 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Hist1h2acC0HKE2 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Hist1h2acC0HKE2 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Hist1h2acC0HKE2 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC13.13□□□□□ -0.31
Hist1h2acC0HKE2 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hist1h2acC0HKE2 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hist1h2acC0HKE2 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC13.13□□□□□ -0.31
Hist1h2acC0HKE2 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Hist1h2acC0HKE2 Gm4691-201ENSMUST00000182339 1000 ntBASIC13.13□□□□□ -0.31
Hist1h2acC0HKE2 Gm2451-201ENSMUST00000199447 999 ntBASIC13.13□□□□□ -0.31
Hist1h2acC0HKE2 Gm10290-201ENSMUST00000200451 999 ntBASIC13.13□□□□□ -0.31
Hist1h2acC0HKE2 Gm5364-201ENSMUST00000216789 889 ntBASIC13.13□□□□□ -0.31
Hist1h2acC0HKE2 AC174742.1-201ENSMUST00000218272 304 ntBASIC13.13□□□□□ -0.31
Hist1h2acC0HKE2 AC154572.2-201ENSMUST00000225105 997 ntBASIC13.13□□□□□ -0.31
Hist1h2acC0HKE2 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hist1h2acC0HKE2 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hist1h2acC0HKE2 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Hist1h2acC0HKE2 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Hist1h2acC0HKE2 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hist1h2acC0HKE2 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hist1h2acC0HKE2 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hist1h2acC0HKE2 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hist1h2acC0HKE2 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Hist1h2acC0HKE2 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hist1h2acC0HKE2 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Hist1h2acC0HKE2 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hist1h2acC0HKE2 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hist1h2acC0HKE2 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Hist1h2acC0HKE2 Tcf21-202ENSMUST00000218002 1788 ntBASIC13.12□□□□□ -0.31
Hist1h2acC0HKE2 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hist1h2acC0HKE2 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hist1h2acC0HKE2 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hist1h2acC0HKE2 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Hist1h2acC0HKE2 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hist1h2acC0HKE2 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Hist1h2acC0HKE2 Gm14042-201ENSMUST00000120139 833 ntBASIC13.12□□□□□ -0.31
Hist1h2acC0HKE2 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC13.12□□□□□ -0.31
Hist1h2acC0HKE2 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC13.12□□□□□ -0.31
Hist1h2acC0HKE2 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC13.12□□□□□ -0.31
Hist1h2acC0HKE2 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms