Protein–RNA interactions for Protein: B2RR83

Ythdc2, Probable ATP-dependent RNA helicase YTHDC2, mousemouse

Known RBP Predictions only

Length 1,445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ythdc2B2RR83 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ythdc2B2RR83 Gm8793-201ENSMUST00000183069 1303 ntBASIC21.25■□□□□ 0.99
Ythdc2B2RR83 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Ythdc2B2RR83 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ythdc2B2RR83 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Ythdc2B2RR83 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ythdc2B2RR83 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ythdc2B2RR83 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ythdc2B2RR83 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ythdc2B2RR83 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ythdc2B2RR83 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ythdc2B2RR83 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ythdc2B2RR83 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ythdc2B2RR83 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ythdc2B2RR83 Gm8805-201ENSMUST00000117848 313 ntBASIC21.24■□□□□ 0.99
Ythdc2B2RR83 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC21.24■□□□□ 0.99
Ythdc2B2RR83 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC21.24■□□□□ 0.99
Ythdc2B2RR83 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ythdc2B2RR83 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ythdc2B2RR83 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ythdc2B2RR83 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ythdc2B2RR83 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Ythdc2B2RR83 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ythdc2B2RR83 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC21.24■□□□□ 0.99
Ythdc2B2RR83 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ythdc2B2RR83 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ythdc2B2RR83 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ythdc2B2RR83 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ythdc2B2RR83 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ythdc2B2RR83 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ythdc2B2RR83 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ythdc2B2RR83 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ythdc2B2RR83 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ythdc2B2RR83 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ythdc2B2RR83 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ythdc2B2RR83 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ythdc2B2RR83 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Ythdc2B2RR83 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ythdc2B2RR83 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
Ythdc2B2RR83 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ythdc2B2RR83 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
Ythdc2B2RR83 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ythdc2B2RR83 Gm17870-201ENSMUST00000219489 1174 ntBASIC21.23■□□□□ 0.99
Ythdc2B2RR83 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ythdc2B2RR83 Gm10702-201ENSMUST00000098929 1268 ntBASIC21.23■□□□□ 0.99
Ythdc2B2RR83 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ythdc2B2RR83 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ythdc2B2RR83 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC21.23■□□□□ 0.99
Ythdc2B2RR83 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Ythdc2B2RR83 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ythdc2B2RR83 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ythdc2B2RR83 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ythdc2B2RR83 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ythdc2B2RR83 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ythdc2B2RR83 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Ythdc2B2RR83 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Ythdc2B2RR83 Gstp-ps-201ENSMUST00000195526 631 ntBASIC21.22■□□□□ 0.99
Ythdc2B2RR83 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Ythdc2B2RR83 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ythdc2B2RR83 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC21.22■□□□□ 0.99
Ythdc2B2RR83 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Ythdc2B2RR83 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ythdc2B2RR83 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ythdc2B2RR83 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC21.21■□□□□ 0.99
Ythdc2B2RR83 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ythdc2B2RR83 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Ythdc2B2RR83 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ythdc2B2RR83 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ythdc2B2RR83 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Ythdc2B2RR83 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC21.21■□□□□ 0.99
Ythdc2B2RR83 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC21.21■□□□□ 0.99
Ythdc2B2RR83 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ythdc2B2RR83 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Ythdc2B2RR83 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC21.21■□□□□ 0.99
Ythdc2B2RR83 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC21.21■□□□□ 0.99
Ythdc2B2RR83 Gm42900-201ENSMUST00000197184 2167 ntBASIC21.21■□□□□ 0.99
Ythdc2B2RR83 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ythdc2B2RR83 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
Ythdc2B2RR83 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC21.21■□□□□ 0.99
Ythdc2B2RR83 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Ythdc2B2RR83 Mir6927-201ENSMUST00000184494 71 ntBASIC21.21■□□□□ 0.99
Ythdc2B2RR83 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC21.21■□□□□ 0.99
Ythdc2B2RR83 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC21.21■□□□□ 0.99
Ythdc2B2RR83 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC21.21■□□□□ 0.99
Ythdc2B2RR83 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC21.21■□□□□ 0.99
Ythdc2B2RR83 AC022775.2-201ENSMUST00000227885 646 ntBASIC21.21■□□□□ 0.99
Ythdc2B2RR83 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ythdc2B2RR83 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ythdc2B2RR83 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ythdc2B2RR83 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ythdc2B2RR83 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ythdc2B2RR83 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.99
Ythdc2B2RR83 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.99
Ythdc2B2RR83 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Ythdc2B2RR83 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ythdc2B2RR83 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ythdc2B2RR83 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ythdc2B2RR83 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ythdc2B2RR83 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ythdc2B2RR83 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms