Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Ubr4A2AN08 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Ubr4A2AN08 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Ubr4A2AN08 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Ubr4A2AN08 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Ubr4A2AN08 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Ubr4A2AN08 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
Ubr4A2AN08 Gm12628-201ENSMUST00000122193 382 ntBASIC7.38□□□□□ -1.23
Ubr4A2AN08 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC7.38□□□□□ -1.23
Ubr4A2AN08 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC7.38□□□□□ -1.23
Ubr4A2AN08 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC7.38□□□□□ -1.23
Ubr4A2AN08 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Ubr4A2AN08 Gm10179-201ENSMUST00000086233 688 ntBASIC7.38□□□□□ -1.23
Ubr4A2AN08 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Ubr4A2AN08 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Ubr4A2AN08 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
Ubr4A2AN08 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Ubr4A2AN08 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Ubr4A2AN08 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC7.38□□□□□ -1.23
Ubr4A2AN08 Gm7809-201ENSMUST00000153199 742 ntBASIC7.38□□□□□ -1.23
Ubr4A2AN08 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Ubr4A2AN08 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC7.38□□□□□ -1.23
Ubr4A2AN08 AC166997.1-201ENSMUST00000225122 572 ntBASIC7.38□□□□□ -1.23
Ubr4A2AN08 Pla2g1b-201ENSMUST00000031495 557 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Ubr4A2AN08 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
Ubr4A2AN08 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
Ubr4A2AN08 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
Ubr4A2AN08 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Ubr4A2AN08 Gm6741-201ENSMUST00000057074 1330 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Ubr4A2AN08 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Ubr4A2AN08 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Ubr4A2AN08 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC7.38□□□□□ -1.23
Ubr4A2AN08 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Ubr4A2AN08 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Ubr4A2AN08 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Ubr4A2AN08 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC7.38□□□□□ -1.23
Ubr4A2AN08 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
Ubr4A2AN08 Gm12218-201ENSMUST00000117666 399 ntBASIC7.38□□□□□ -1.23
Ubr4A2AN08 Gm16481-201ENSMUST00000119074 1227 ntBASIC7.38□□□□□ -1.23
Ubr4A2AN08 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Ubr4A2AN08 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Ubr4A2AN08 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Ubr4A2AN08 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC7.38□□□□□ -1.23
Ubr4A2AN08 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Ubr4A2AN08 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC7.38□□□□□ -1.23
Ubr4A2AN08 AI839979-201ENSMUST00000200738 654 ntTSL 2 BASIC7.38□□□□□ -1.23
Ubr4A2AN08 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC7.38□□□□□ -1.23
Ubr4A2AN08 Gm5950-201ENSMUST00000213337 772 ntBASIC7.38□□□□□ -1.23
Ubr4A2AN08 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC7.38□□□□□ -1.23
Ubr4A2AN08 Abracl-203ENSMUST00000218994 425 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
Ubr4A2AN08 Gm2824-203ENSMUST00000226189 1228 ntBASIC7.38□□□□□ -1.23
Ubr4A2AN08 Itm2b-204ENSMUST00000228637 783 ntBASIC7.38□□□□□ -1.23
Ubr4A2AN08 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Ubr4A2AN08 Gm8385-201ENSMUST00000058999 643 ntBASIC7.38□□□□□ -1.23
Ubr4A2AN08 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Ubr4A2AN08 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Ubr4A2AN08 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Ubr4A2AN08 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC7.38□□□□□ -1.23
Ubr4A2AN08 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Ubr4A2AN08 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Ubr4A2AN08 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Ubr4A2AN08 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Ubr4A2AN08 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
Ubr4A2AN08 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Ubr4A2AN08 Gm5049-201ENSMUST00000195878 1590 ntBASIC7.38□□□□□ -1.23
Ubr4A2AN08 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Ubr4A2AN08 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Ubr4A2AN08 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Ubr4A2AN08 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Ubr4A2AN08 Hist1h4i-201ENSMUST00000102977 727 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Ubr4A2AN08 Gm13888-201ENSMUST00000119148 422 ntBASIC7.38□□□□□ -1.23
Ubr4A2AN08 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC7.38□□□□□ -1.23
Ubr4A2AN08 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC7.38□□□□□ -1.23
Ubr4A2AN08 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Ubr4A2AN08 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Ubr4A2AN08 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Ubr4A2AN08 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC7.38□□□□□ -1.23
Ubr4A2AN08 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Ubr4A2AN08 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
Ubr4A2AN08 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC7.37□□□□□ -1.23
Ubr4A2AN08 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
Ubr4A2AN08 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Ubr4A2AN08 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC7.37□□□□□ -1.23
Ubr4A2AN08 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Ubr4A2AN08 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Ubr4A2AN08 Gm10146-201ENSMUST00000072739 309 ntBASIC7.37□□□□□ -1.23
Ubr4A2AN08 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
Ubr4A2AN08 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
Ubr4A2AN08 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Ubr4A2AN08 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC7.37□□□□□ -1.23
Ubr4A2AN08 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Ubr4A2AN08 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Ubr4A2AN08 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Ubr4A2AN08 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC7.37□□□□□ -1.23
Ubr4A2AN08 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Ubr4A2AN08 Mir133a-1hg-201ENSMUST00000179771 395 ntTSL 3 BASIC7.37□□□□□ -1.23
Ubr4A2AN08 Gm9139-201ENSMUST00000218817 700 ntBASIC7.37□□□□□ -1.23
Ubr4A2AN08 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Ubr4A2AN08 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Ubr4A2AN08 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms