Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
PdfS4R2K0 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
PdfS4R2K0 Carlr-201ENSMUST00000181515 2574 ntBASIC11.03□□□□□ -0.64
PdfS4R2K0 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC11.03□□□□□ -0.64
PdfS4R2K0 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
PdfS4R2K0 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
PdfS4R2K0 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
PdfS4R2K0 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC11.03□□□□□ -0.64
PdfS4R2K0 Gm30238-201ENSMUST00000195528 2603 ntBASIC11.03□□□□□ -0.64
PdfS4R2K0 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
PdfS4R2K0 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
PdfS4R2K0 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC11.03□□□□□ -0.64
PdfS4R2K0 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
PdfS4R2K0 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC11.03□□□□□ -0.64
PdfS4R2K0 Gm25745-201ENSMUST00000174945 133 ntBASIC11.03□□□□□ -0.64
PdfS4R2K0 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
PdfS4R2K0 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC11.03□□□□□ -0.64
PdfS4R2K0 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
PdfS4R2K0 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC11.03□□□□□ -0.64
PdfS4R2K0 Gm9449-201ENSMUST00000207265 1011 ntBASIC11.03□□□□□ -0.64
PdfS4R2K0 Gm6376-201ENSMUST00000209407 580 ntBASIC11.03□□□□□ -0.64
PdfS4R2K0 Cmtm5-203ENSMUST00000227441 610 ntBASIC11.03□□□□□ -0.64
PdfS4R2K0 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC11.03□□□□□ -0.64
PdfS4R2K0 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
PdfS4R2K0 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
PdfS4R2K0 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
PdfS4R2K0 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
PdfS4R2K0 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC11.03□□□□□ -0.64
PdfS4R2K0 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
PdfS4R2K0 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
PdfS4R2K0 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
PdfS4R2K0 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
PdfS4R2K0 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
PdfS4R2K0 Acot6-202ENSMUST00000222921 3622 ntBASIC11.03□□□□□ -0.64
PdfS4R2K0 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
PdfS4R2K0 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
PdfS4R2K0 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC11.03□□□□□ -0.64
PdfS4R2K0 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
PdfS4R2K0 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
PdfS4R2K0 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC11.02□□□□□ -0.64
PdfS4R2K0 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC11.02□□□□□ -0.64
PdfS4R2K0 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
PdfS4R2K0 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
PdfS4R2K0 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.64
PdfS4R2K0 Gm42928-201ENSMUST00000197338 3339 ntBASIC11.02□□□□□ -0.64
PdfS4R2K0 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
PdfS4R2K0 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
PdfS4R2K0 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
PdfS4R2K0 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
PdfS4R2K0 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
PdfS4R2K0 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
PdfS4R2K0 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
PdfS4R2K0 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
PdfS4R2K0 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
PdfS4R2K0 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
PdfS4R2K0 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
PdfS4R2K0 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
PdfS4R2K0 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.65
PdfS4R2K0 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
PdfS4R2K0 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
PdfS4R2K0 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
PdfS4R2K0 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
PdfS4R2K0 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
PdfS4R2K0 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC11.02□□□□□ -0.65
PdfS4R2K0 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
PdfS4R2K0 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC11.02□□□□□ -0.65
PdfS4R2K0 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
PdfS4R2K0 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
PdfS4R2K0 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC11.02□□□□□ -0.65
PdfS4R2K0 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
PdfS4R2K0 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC11.02□□□□□ -0.65
PdfS4R2K0 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC11.02□□□□□ -0.65
PdfS4R2K0 Gm8655-201ENSMUST00000221159 852 ntBASIC11.02□□□□□ -0.65
PdfS4R2K0 AC117588.1-201ENSMUST00000228510 999 ntBASIC11.02□□□□□ -0.65
PdfS4R2K0 Gm7461-201ENSMUST00000058918 827 ntBASIC11.02□□□□□ -0.65
PdfS4R2K0 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
PdfS4R2K0 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
PdfS4R2K0 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC11.02□□□□□ -0.65
PdfS4R2K0 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
PdfS4R2K0 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
PdfS4R2K0 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
PdfS4R2K0 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
PdfS4R2K0 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC11.02□□□□□ -0.65
PdfS4R2K0 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
PdfS4R2K0 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
PdfS4R2K0 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
PdfS4R2K0 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
PdfS4R2K0 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
PdfS4R2K0 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
PdfS4R2K0 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
PdfS4R2K0 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
PdfS4R2K0 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
PdfS4R2K0 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC11.02□□□□□ -0.65
PdfS4R2K0 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC11.02□□□□□ -0.65
PdfS4R2K0 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
PdfS4R2K0 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
PdfS4R2K0 Gm26513-201ENSMUST00000181802 2489 ntBASIC11.01□□□□□ -0.65
PdfS4R2K0 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
PdfS4R2K0 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
PdfS4R2K0 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms