Protein–RNA interactions for Protein: Q9Z2V5

Hdac6, Histone deacetylase 6, mousemouse

Predictions only

Length 1,149 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac6Q9Z2V5 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Hdac6Q9Z2V5 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Hdac6Q9Z2V5 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Hdac6Q9Z2V5 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.86■□□□□ 0.45
Hdac6Q9Z2V5 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hdac6Q9Z2V5 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
Hdac6Q9Z2V5 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC17.86■□□□□ 0.45
Hdac6Q9Z2V5 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC17.86■□□□□ 0.45
Hdac6Q9Z2V5 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC17.86■□□□□ 0.45
Hdac6Q9Z2V5 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hdac6Q9Z2V5 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hdac6Q9Z2V5 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hdac6Q9Z2V5 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hdac6Q9Z2V5 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hdac6Q9Z2V5 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Hdac6Q9Z2V5 Gm16011-201ENSMUST00000121567 2662 ntBASIC17.85■□□□□ 0.45
Hdac6Q9Z2V5 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hdac6Q9Z2V5 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hdac6Q9Z2V5 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
Hdac6Q9Z2V5 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hdac6Q9Z2V5 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hdac6Q9Z2V5 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Hdac6Q9Z2V5 Gm29649-201ENSMUST00000185649 419 ntBASIC17.85■□□□□ 0.45
Hdac6Q9Z2V5 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hdac6Q9Z2V5 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC17.85■□□□□ 0.45
Hdac6Q9Z2V5 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Hdac6Q9Z2V5 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
Hdac6Q9Z2V5 AC114543.1-201ENSMUST00000226451 1558 ntBASIC17.85■□□□□ 0.45
Hdac6Q9Z2V5 AC122459.1-201ENSMUST00000228373 885 ntBASIC17.85■□□□□ 0.45
Hdac6Q9Z2V5 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hdac6Q9Z2V5 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hdac6Q9Z2V5 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Hdac6Q9Z2V5 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hdac6Q9Z2V5 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.85■□□□□ 0.45
Hdac6Q9Z2V5 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Hdac6Q9Z2V5 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Hdac6Q9Z2V5 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Hdac6Q9Z2V5 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hdac6Q9Z2V5 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hdac6Q9Z2V5 Gm42471-201ENSMUST00000201457 1865 ntBASIC17.84■□□□□ 0.45
Hdac6Q9Z2V5 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hdac6Q9Z2V5 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hdac6Q9Z2V5 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hdac6Q9Z2V5 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC17.84■□□□□ 0.45
Hdac6Q9Z2V5 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC17.84■□□□□ 0.45
Hdac6Q9Z2V5 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Hdac6Q9Z2V5 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Hdac6Q9Z2V5 Mir1247-201ENSMUST00000116706 82 ntBASIC17.84■□□□□ 0.45
Hdac6Q9Z2V5 Gm16342-201ENSMUST00000124025 1025 ntBASIC17.84■□□□□ 0.45
Hdac6Q9Z2V5 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC17.84■□□□□ 0.45
Hdac6Q9Z2V5 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
Hdac6Q9Z2V5 Gm24420-201ENSMUST00000176676 59 ntBASIC17.84■□□□□ 0.45
Hdac6Q9Z2V5 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC17.84■□□□□ 0.45
Hdac6Q9Z2V5 Gm9299-201ENSMUST00000206392 1140 ntBASIC17.84■□□□□ 0.45
Hdac6Q9Z2V5 Gm6983-201ENSMUST00000214912 628 ntBASIC17.84■□□□□ 0.45
Hdac6Q9Z2V5 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hdac6Q9Z2V5 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Hdac6Q9Z2V5 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hdac6Q9Z2V5 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hdac6Q9Z2V5 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Hdac6Q9Z2V5 Gm8399-201ENSMUST00000082300 1117 ntBASIC17.84■□□□□ 0.45
Hdac6Q9Z2V5 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Hdac6Q9Z2V5 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hdac6Q9Z2V5 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
Hdac6Q9Z2V5 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hdac6Q9Z2V5 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hdac6Q9Z2V5 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hdac6Q9Z2V5 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hdac6Q9Z2V5 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Hdac6Q9Z2V5 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hdac6Q9Z2V5 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Hdac6Q9Z2V5 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
Hdac6Q9Z2V5 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Hdac6Q9Z2V5 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Hdac6Q9Z2V5 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Hdac6Q9Z2V5 Gm9109-201ENSMUST00000120254 1405 ntBASIC17.83■□□□□ 0.45
Hdac6Q9Z2V5 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Hdac6Q9Z2V5 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Hdac6Q9Z2V5 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Hdac6Q9Z2V5 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC17.83■□□□□ 0.44
Hdac6Q9Z2V5 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Hdac6Q9Z2V5 Ighv1-51-201ENSMUST00000192903 354 ntBASIC17.83■□□□□ 0.44
Hdac6Q9Z2V5 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Hdac6Q9Z2V5 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Hdac6Q9Z2V5 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC17.83■□□□□ 0.44
Hdac6Q9Z2V5 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Hdac6Q9Z2V5 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Hdac6Q9Z2V5 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Hdac6Q9Z2V5 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Hdac6Q9Z2V5 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.83■□□□□ 0.44
Hdac6Q9Z2V5 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Hdac6Q9Z2V5 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Hdac6Q9Z2V5 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Hdac6Q9Z2V5 Carlr-201ENSMUST00000181515 2574 ntBASIC17.83■□□□□ 0.44
Hdac6Q9Z2V5 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC17.82■□□□□ 0.44
Hdac6Q9Z2V5 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC17.82■□□□□ 0.44
Hdac6Q9Z2V5 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hdac6Q9Z2V5 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Hdac6Q9Z2V5 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Hdac6Q9Z2V5 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms