Protein–RNA interactions for Protein: Q9Z2C6

Upk1b, Uroplakin-1b, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1bQ9Z2C6 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Upk1bQ9Z2C6 Gm33142-201ENSMUST00000193913 867 ntBASIC13.33□□□□□ -0.28
Upk1bQ9Z2C6 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC13.33□□□□□ -0.28
Upk1bQ9Z2C6 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Upk1bQ9Z2C6 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Upk1bQ9Z2C6 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Upk1bQ9Z2C6 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Upk1bQ9Z2C6 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Upk1bQ9Z2C6 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.28
Upk1bQ9Z2C6 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Upk1bQ9Z2C6 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Upk1bQ9Z2C6 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Upk1bQ9Z2C6 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Upk1bQ9Z2C6 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Upk1bQ9Z2C6 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Upk1bQ9Z2C6 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Upk1bQ9Z2C6 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upk1bQ9Z2C6 Gm8096-201ENSMUST00000209921 1591 ntBASIC13.32□□□□□ -0.28
Upk1bQ9Z2C6 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Upk1bQ9Z2C6 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upk1bQ9Z2C6 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upk1bQ9Z2C6 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upk1bQ9Z2C6 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upk1bQ9Z2C6 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upk1bQ9Z2C6 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upk1bQ9Z2C6 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upk1bQ9Z2C6 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upk1bQ9Z2C6 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upk1bQ9Z2C6 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upk1bQ9Z2C6 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Upk1bQ9Z2C6 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Upk1bQ9Z2C6 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Upk1bQ9Z2C6 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upk1bQ9Z2C6 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upk1bQ9Z2C6 Gm25990-201ENSMUST00000102440 86 ntBASIC13.32□□□□□ -0.28
Upk1bQ9Z2C6 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upk1bQ9Z2C6 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upk1bQ9Z2C6 Gm6944-201ENSMUST00000182449 1006 ntBASIC13.32□□□□□ -0.28
Upk1bQ9Z2C6 Gm44357-201ENSMUST00000195897 142 ntBASIC13.32□□□□□ -0.28
Upk1bQ9Z2C6 Gm19658-201ENSMUST00000196231 138 ntBASIC13.32□□□□□ -0.28
Upk1bQ9Z2C6 Gm44367-201ENSMUST00000196836 138 ntBASIC13.32□□□□□ -0.28
Upk1bQ9Z2C6 Gm44350-201ENSMUST00000197197 138 ntBASIC13.32□□□□□ -0.28
Upk1bQ9Z2C6 Gm44390-201ENSMUST00000197533 144 ntBASIC13.32□□□□□ -0.28
Upk1bQ9Z2C6 Gm44313-201ENSMUST00000198018 138 ntBASIC13.32□□□□□ -0.28
Upk1bQ9Z2C6 Gm44486-201ENSMUST00000198508 138 ntBASIC13.32□□□□□ -0.28
Upk1bQ9Z2C6 Gm44314-201ENSMUST00000199263 138 ntBASIC13.32□□□□□ -0.28
Upk1bQ9Z2C6 Gm44394-201ENSMUST00000199558 138 ntBASIC13.32□□□□□ -0.28
Upk1bQ9Z2C6 Gm44484-201ENSMUST00000199873 138 ntBASIC13.32□□□□□ -0.28
Upk1bQ9Z2C6 Gm44466-201ENSMUST00000200264 138 ntBASIC13.32□□□□□ -0.28
Upk1bQ9Z2C6 Gm44359-201ENSMUST00000200671 138 ntBASIC13.32□□□□□ -0.28
Upk1bQ9Z2C6 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upk1bQ9Z2C6 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upk1bQ9Z2C6 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upk1bQ9Z2C6 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upk1bQ9Z2C6 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Upk1bQ9Z2C6 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upk1bQ9Z2C6 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upk1bQ9Z2C6 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Upk1bQ9Z2C6 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Upk1bQ9Z2C6 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upk1bQ9Z2C6 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upk1bQ9Z2C6 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.31□□□□□ -0.28
Upk1bQ9Z2C6 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Upk1bQ9Z2C6 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Upk1bQ9Z2C6 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Upk1bQ9Z2C6 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Upk1bQ9Z2C6 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Upk1bQ9Z2C6 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Upk1bQ9Z2C6 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Upk1bQ9Z2C6 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Upk1bQ9Z2C6 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Upk1bQ9Z2C6 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Upk1bQ9Z2C6 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Upk1bQ9Z2C6 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Upk1bQ9Z2C6 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Upk1bQ9Z2C6 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Upk1bQ9Z2C6 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Upk1bQ9Z2C6 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Upk1bQ9Z2C6 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Upk1bQ9Z2C6 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Upk1bQ9Z2C6 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC13.31□□□□□ -0.28
Upk1bQ9Z2C6 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Upk1bQ9Z2C6 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Upk1bQ9Z2C6 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.31□□□□□ -0.28
Upk1bQ9Z2C6 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Upk1bQ9Z2C6 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Upk1bQ9Z2C6 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Upk1bQ9Z2C6 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Upk1bQ9Z2C6 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Upk1bQ9Z2C6 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Upk1bQ9Z2C6 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Upk1bQ9Z2C6 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Upk1bQ9Z2C6 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Upk1bQ9Z2C6 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Upk1bQ9Z2C6 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Upk1bQ9Z2C6 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Upk1bQ9Z2C6 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Upk1bQ9Z2C6 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Upk1bQ9Z2C6 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Upk1bQ9Z2C6 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms