Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Smarcb1Q9Z0H3 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smarcb1Q9Z0H3 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.88□□□□□ -0.03
Smarcb1Q9Z0H3 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Smarcb1Q9Z0H3 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Smarcb1Q9Z0H3 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smarcb1Q9Z0H3 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smarcb1Q9Z0H3 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smarcb1Q9Z0H3 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Smarcb1Q9Z0H3 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
Smarcb1Q9Z0H3 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcb1Q9Z0H3 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcb1Q9Z0H3 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Smarcb1Q9Z0H3 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcb1Q9Z0H3 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcb1Q9Z0H3 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcb1Q9Z0H3 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcb1Q9Z0H3 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC14.87□□□□□ -0.03
Smarcb1Q9Z0H3 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Smarcb1Q9Z0H3 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcb1Q9Z0H3 Gm12859-201ENSMUST00000117834 427 ntBASIC14.87□□□□□ -0.03
Smarcb1Q9Z0H3 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Smarcb1Q9Z0H3 Gm6283-201ENSMUST00000182369 1000 ntBASIC14.87□□□□□ -0.03
Smarcb1Q9Z0H3 H2-Pa-201ENSMUST00000182803 626 ntBASIC14.87□□□□□ -0.03
Smarcb1Q9Z0H3 Gm21470-201ENSMUST00000187680 696 ntBASIC14.87□□□□□ -0.03
Smarcb1Q9Z0H3 Gtpbp10-211ENSMUST00000198799 648 ntBASIC14.87□□□□□ -0.03
Smarcb1Q9Z0H3 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcb1Q9Z0H3 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcb1Q9Z0H3 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Smarcb1Q9Z0H3 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcb1Q9Z0H3 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcb1Q9Z0H3 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcb1Q9Z0H3 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcb1Q9Z0H3 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcb1Q9Z0H3 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcb1Q9Z0H3 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcb1Q9Z0H3 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcb1Q9Z0H3 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.87□□□□□ -0.03
Smarcb1Q9Z0H3 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcb1Q9Z0H3 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcb1Q9Z0H3 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcb1Q9Z0H3 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcb1Q9Z0H3 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smarcb1Q9Z0H3 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Smarcb1Q9Z0H3 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smarcb1Q9Z0H3 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smarcb1Q9Z0H3 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smarcb1Q9Z0H3 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smarcb1Q9Z0H3 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smarcb1Q9Z0H3 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Smarcb1Q9Z0H3 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smarcb1Q9Z0H3 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smarcb1Q9Z0H3 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC14.86□□□□□ -0.03
Smarcb1Q9Z0H3 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Smarcb1Q9Z0H3 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC14.86□□□□□ -0.03
Smarcb1Q9Z0H3 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC14.86□□□□□ -0.03
Smarcb1Q9Z0H3 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Smarcb1Q9Z0H3 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC14.86□□□□□ -0.03
Smarcb1Q9Z0H3 Gm10766-202ENSMUST00000194123 606 ntBASIC14.86□□□□□ -0.03
Smarcb1Q9Z0H3 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC14.86□□□□□ -0.03
Smarcb1Q9Z0H3 Gm6218-201ENSMUST00000219812 628 ntBASIC14.86□□□□□ -0.03
Smarcb1Q9Z0H3 Gm9797-201ENSMUST00000052902 613 ntBASIC14.86□□□□□ -0.03
Smarcb1Q9Z0H3 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Smarcb1Q9Z0H3 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smarcb1Q9Z0H3 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smarcb1Q9Z0H3 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smarcb1Q9Z0H3 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Smarcb1Q9Z0H3 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smarcb1Q9Z0H3 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smarcb1Q9Z0H3 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smarcb1Q9Z0H3 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smarcb1Q9Z0H3 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smarcb1Q9Z0H3 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Smarcb1Q9Z0H3 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smarcb1Q9Z0H3 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smarcb1Q9Z0H3 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Smarcb1Q9Z0H3 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smarcb1Q9Z0H3 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smarcb1Q9Z0H3 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.85□□□□□ -0.03
Smarcb1Q9Z0H3 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smarcb1Q9Z0H3 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Smarcb1Q9Z0H3 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smarcb1Q9Z0H3 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smarcb1Q9Z0H3 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smarcb1Q9Z0H3 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC14.85□□□□□ -0.03
Smarcb1Q9Z0H3 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smarcb1Q9Z0H3 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Smarcb1Q9Z0H3 AC140375.2-201ENSMUST00000225283 584 ntBASIC14.85□□□□□ -0.03
Smarcb1Q9Z0H3 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Smarcb1Q9Z0H3 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smarcb1Q9Z0H3 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smarcb1Q9Z0H3 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smarcb1Q9Z0H3 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smarcb1Q9Z0H3 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Smarcb1Q9Z0H3 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smarcb1Q9Z0H3 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Smarcb1Q9Z0H3 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.85□□□□□ -0.03
Smarcb1Q9Z0H3 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smarcb1Q9Z0H3 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.85□□□□□ -0.03
Smarcb1Q9Z0H3 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms